Co-expression analysis

Gene ID	PtpAffx.7369.1.A1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g64510: unknown protein (HF=2e-5)
Module size	9 genes
NF	0.43
%ile	71.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	88.1	0.91	PtpAffx.7369.1.A1_at	BP930064	hypothetical protein	-	2e-5	At5g64510	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.63	88.1	0.91	PtpAffx.81285.2.S1_at	BP922230	hypothetical protein	-	5e-10	At5g64510	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.56	83.9	0.91	PtpAffx.55455.1.S1_a_at	CV242141	beta-ketoacyl-coa synthase family protein /// beta-ketoacyl-coa synthase family protein	-	4e-12	At1g04220	KCS2 (3-KETOACYL-COA SYNTHASE 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.93	PtpAffx.23797.2.S1_at	CV248730	hypothetical protein	-	7e-16	At4g20870	FAH2 (FATTY ACID HYDROXYLASE 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.91	PtpAffx.209398.1.S1_at	pmrna18615	p-aminobenzoate synthase	-	1e-25	At2g28880	emb1997 (embryo defective 1997)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.91	PtpAffx.3989.2.S1_at	BU880425	aquaporin, MIP family, TIP subfamily	-	2e-19	At4g01470	TIP1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.91	Ptp.4040.1.S1_s_at	BU861549	hypothetical protein	-	2e+0	At4g21000	ACA6 (ALPHA CARBONIC ANHYDRASE 6)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.32	55.2	0.92	Ptp.574.1.A1_at	CK088966	hypothetical protein	-	1e+0	At4g33670	L-galactose dehydrogenase (L-GalDH)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.28	50.5	0.91	PtpAffx.5661.1.A1_x_at	CX657739	hypothetical protein	-	3e-22	At1g64650	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	95.6	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.1	95.5	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.1	95.5	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.0	92.9	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM328563	Populus x canescens root hypoxia_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM328566	Populus x canescens root hypoxia_rep_08	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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