Co-expression analysis

Gene ID PtpAffx.73676.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g41070: DRB5 (DSRNA-BINDING PROTEIN 5) (HF=2e+0)
Module size 9 genes
NF 0.42
%ile 71.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7393.60.87PtpAffx.73676.1.S1_atDN501254hypothetical protein-2e+0At5g41070DRB5 (DSRNA-BINDING PROTEIN 5)O.I.H.G.S.X.
0.5582.20.88PtpAffx.5184.1.A1_atCV258220hypothetical protein-3e-17At2g33205-O.I.H.G.S.X.
0.5380.50.89PtpAffx.205071.1.S1_x_atpmrna10049hypothetical protein-2e-53At2g36890RAX2 (REGULATOR OF AXILLARY MERISTEMS 2)O.I.H.G.S.X.
0.5078.60.91PtpAffx.205071.1.S1_s_atpmrna10049hypothetical protein-2e-53At2g36890RAX2 (REGULATOR OF AXILLARY MERISTEMS 2)O.I.H.G.S.X.
0.4369.70.88PtpAffx.140558.1.A1_atCV253865hypothetical protein-4e-1At5g53045-O.I.H.G.S.X.
0.4067.00.88PtpAffx.202621.1.S1_s_atpmrna5240hypothetical protein-1e-12At3g25400-O.I.H.G.S.X.
0.3559.70.88PtpAffx.207828.1.S1_x_atpmrna15551hypothetical protein-1e-11At3g13890ATMYB26 (MYB DOMAIN PROTEIN 26)O.I.H.G.S.X.
0.2850.50.89PtpAffx.223421.1.S1_atpmrna41422hypothetical protein-7e-1At2g31725unknown proteinO.I.H.G.S.X.
0.2441.80.89PtpAffx.207323.1.S1_s_atpmrna14519hypothetical protein-1e-21At5g66600unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.098.4GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
6.097.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.096.6GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.289.3GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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