Co-expression analysis

Gene ID PtpAffx.71189.1.A1_a_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g08040: unknown protein (HF=1e-32)
Module size 14 genes
NF 0.10
%ile 21.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6588.60.87PtpAffx.71189.1.A1_a_atCV277875hypothetical protein-1e-32At1g08040unknown proteinO.I.H.G.S.X.
0.2136.50.93PtpAffx.52716.2.A1_s_atCV260868hypothetical protein-2e-40At5g17380pyruvate decarboxylase family proteinO.I.H.G.S.X.
0.2034.60.88PtpAffx.49159.1.A1_atCX180149--5e+0At5g20160ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinO.I.H.G.S.X.
0.1729.10.93PtpAffx.202668.1.S1_atpmrna5323hypothetical protein-5e+0At5g01580OSH1 (OAS HIGH ACCUMULATION 1)O.I.H.G.S.X.
0.1423.50.92PtpAffx.162745.1.S1_atBU827623hypothetical protein-1e-53At2g33150PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3)O.I.H.G.S.X.
0.1423.50.92PtpAffx.153346.1.A1_atCV261030--4e+0At5g50200WR3 (WOUND-RESPONSIVE 3)O.I.H.G.S.X.
0.1321.60.91Ptp.399.1.A1_atCK088846hypothetical protein-3e-8At3g61160shaggy-related protein kinase beta / ASK-beta (ASK2)O.I.H.G.S.X.
0.1321.60.90PtpAffx.161323.1.S1_a_atCX186124hypothetical protein-1e-53At4g31750WIN2 (HOPW1-1-INTERACTING 2)O.I.H.G.S.X.
0.1219.60.91PtpAffx.24402.1.S1_atCV261093hypothetical protein-2e-5At3g10360APUM4 (Arabidopsis Pumilio 4)O.I.H.G.S.X.
0.1016.30.92Ptp.597.1.A1_s_atCK089167hypothetical protein-1e-31At4g35260IDH1 (ISOCITRATE DEHYDROGENASE 1)O.I.H.G.S.X.
0.0914.60.93PtpAffx.24297.1.S1_atCV265424hypothetical protein-3e-2At2g27460sec23/sec24 transport family proteinO.I.H.G.S.X.
0.0711.60.91PtpAffx.161194.1.S1_atCN549561hypothetical protein-5e-13At4g25360-O.I.H.G.S.X.
0.058.30.88PtpAffx.204893.1.S1_atpmrna9664hypothetical protein-8e-20At5g12430DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.046.90.90PtpAffx.10648.1.S1_s_atCN519395hypothetical protein-8e-74At3g05580serine/threonine protein phosphatase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.992.5GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.684.5GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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