Co-expression analysis

Gene ID	PtpAffx.61161.1.A1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g22190: unknown protein (HF=5e+0)
Module size	38 genes
NF	0.35
%ile	61.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.95	99.7	0.90	PtpAffx.61161.1.A1_at	CV240842	hypothetical protein	-	5e+0	At5g22190	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.49	75.7	0.95	PtpAffx.11683.1.A1_at	CK093713	hypothetical protein	-	1e-13	At4g30200	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.49	75.7	0.94	PtpAffx.3969.1.S1_s_at	CV271229	hypothetical protein	-	1e-128	At3g07890	RabGAP/TBC domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.47	74.6	0.94	PtpAffx.14532.1.A1_at	CK090232	hypothetical protein	-	3e-2	At5g64020	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.94	PtpAffx.153966.2.A1_at	CV235142	hypothetical protein	-	1e-7	At1g65320	CBS domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.45	72.3	0.93	PtpAffx.213752.1.S1_at	pmrna26858	glycosyltransferase, CAZy family GT8	-	5e-18	At2g38650	GAUT7 (GALACTURONOSYLTRANSFERASE 7)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.43	69.7	0.94	PtpAffx.206376.1.S1_at	pmrna12662	hypothetical protein	-	3e-62	At2g19400	protein kinase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.41	67.7	0.92	PtpAffx.225366.1.S1_x_at	pmrna44671	hypothetical protein	-	1e+0	At5g26190	DC1 domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.41	67.7	0.91	PtpAffx.119838.2.S1_at	CK103747	-	-	1e+0	At1g60830	U2 snRNP auxiliary factor large subunit, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.41	67.7	0.94	PtpAffx.75330.1.A1_s_at	CV273977	hypothetical protein	-	1e-35	At5g23300	PYRD (pyrimidine d)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.95	PtpAffx.213661.1.S1_at	pmrna26675	hypothetical protein	-	2e-10	At3g51770	ETO1 (ETHYLENE OVERPRODUCER 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.39	64.6	0.93	PtpAffx.65890.1.S1_s_at	CN523643	hypothetical protein	-	5e-4	At4g18070	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.37	62.3	0.95	Ptp.5517.3.A1_at	CV226502	hypothetical protein	-	5e-19	At3g23980	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.37	62.3	0.91	PtpAffx.121088.2.A1_at	CV278956	-	-	4e-4	At1g80760	NIP6	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.37	62.3	0.92	PtpAffx.204982.1.S1_s_at	pmrna9866	hypothetical protein	-	3e-12	At5g59790	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.35	59.7	0.93	PtpAffx.137281.1.S1_at	CV235386	-	-	2e-47	At2g18460	LCV3 (like cov 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.35	59.7	0.94	PtpAffx.221300.1.S1_s_at	pmrna38086	calcium dependent protein kinase 11 /// calcium dependent protein kinase 4 /// hypothetical protein	-	3e-63	At4g09570	CPK4	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.35	59.7	0.93	PtpAffx.209995.1.S1_at	pmrna19718	hypothetical protein	-	9e-84	At5g54310	AGD5 (ARF-GAP domain 5)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.35	59.7	0.93	PtpAffx.12640.1.A1_at	CV240965	hypothetical protein	-	2e-148	At3g20290	ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.34	58.3	0.94	PtpAffx.29775.1.S1_a_at	CV282899	hypothetical protein	-	8e-50	At3g48790	serine C-palmitoyltransferase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.34	58.3	0.96	PtpAffx.201782.1.S1_s_at	pmrna3552	hypothetical protein	-	2e-74	At4g09810	transporter-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.34	58.3	0.92	PtpAffx.200762.1.S1_at	pmrna1477	metal tolerance protein	-	2e-6	At2g29410	MTPB1 (METAL TOLERANCE PROTEIN B1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.34	58.3	0.93	PtpAffx.120529.1.A1_s_at	CV275657	hypothetical protein	-	2e-7	At1g72170	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.33	57.5	0.94	PtpAffx.2394.1.A1_s_at	CX659431	hypothetical protein	-	2e-45	At1g33170	dehydration-responsive family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.33	57.5	0.95	PtpAffx.140896.1.A1_s_at	CV266164	hypothetical protein	-	1e-9	At5g15530	BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.33	57.5	0.93	Ptp.37.1.S1_at	CA929635	hypothetical protein	-	9e-12	At4g17890	AGD8 (ARF-GAP DOMAIN 8)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.32	55.2	0.94	PtpAffx.101307.1.A1_at	CV261304	hypothetical protein	-	3e-8	At4g14950	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	0.94	PtpAffx.142301.1.S1_s_at	CK103416	hypothetical protein	-	5e-24	At3g10370	SDP6 (SUGAR-DEPENDENT 6)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	0.94	PtpAffx.14302.1.S1_at	CV256500	hypothetical protein	-	2e-1	At3g11330	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.94	PtpAffx.78476.1.A1_at	DN492751	hypothetical protein	-	1e-4	At2g03690	coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.92	PtpAffx.202674.1.S1_s_at	pmrna5332	hypothetical protein	-	5e-11	At3g25030	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.93	PtpAffx.150652.1.S1_at	CK106078	hypothetical protein	-	6e-21	At4g36940	NAPRT1 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.95	PtpAffx.7974.1.S1_at	CA924099	hypothetical protein	-	5e-19	At2g20900	diacylglycerol kinase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	0.91	PtpAffx.203080.1.S1_at	pmrna6095	hypothetical protein	-	3e-24	At3g51470	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.26	45.2	0.92	Ptp.2292.1.A1_at	CV232695	hypothetical protein	-	4e-125	At4g35950	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.22	38.3	0.94	Ptp.1593.1.A1_s_at	CV234995	hypothetical protein	-	5e-3	At2g40710	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.20	34.6	0.95	Ptp.6508.1.S1_at	CV259562	hypothetical protein	-	2e-59	At3g55530	SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.14	23.5	0.95	PtpAffx.201426.1.S1_s_at	pmrna2818	hypothetical protein	-	3e-53	At4g10440	dehydration-responsive family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	96.5	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.0	95.3	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.5	94.3	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.5	83.5	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
1.4	82.3	GSM327402	Populus balsamifera_20071015_Etiolated_seedling_6d_2	GSE13990	Populus balsamifera developmental tissue series
1.3	81.0	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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