Co-expression analysis

Gene ID PtpAffx.61161.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g22190: unknown protein (HF=5e+0)
Module size 38 genes
NF 0.35
%ile 61.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.70.90PtpAffx.61161.1.A1_atCV240842hypothetical protein-5e+0At5g22190unknown proteinO.I.H.G.S.X.
0.4975.70.95PtpAffx.11683.1.A1_atCK093713hypothetical protein-1e-13At4g30200-O.I.H.G.S.X.
0.4975.70.94PtpAffx.3969.1.S1_s_atCV271229hypothetical protein-1e-128At3g07890RabGAP/TBC domain-containing proteinO.I.H.G.S.X.
0.4774.60.94PtpAffx.14532.1.A1_atCK090232hypothetical protein-3e-2At5g64020unknown proteinO.I.H.G.S.X.
0.4673.70.94PtpAffx.153966.2.A1_atCV235142hypothetical protein-1e-7At1g65320CBS domain-containing proteinO.I.H.G.S.X.
0.4572.30.93PtpAffx.213752.1.S1_atpmrna26858glycosyltransferase, CAZy family GT8-5e-18At2g38650GAUT7 (GALACTURONOSYLTRANSFERASE 7)O.I.H.G.S.X.
0.4369.70.94PtpAffx.206376.1.S1_atpmrna12662hypothetical protein-3e-62At2g19400protein kinase, putativeO.I.H.G.S.X.
0.4167.70.92PtpAffx.225366.1.S1_x_atpmrna44671hypothetical protein-1e+0At5g26190DC1 domain-containing proteinO.I.H.G.S.X.
0.4167.70.91PtpAffx.119838.2.S1_atCK103747--1e+0At1g60830U2 snRNP auxiliary factor large subunit, putativeO.I.H.G.S.X.
0.4167.70.94PtpAffx.75330.1.A1_s_atCV273977hypothetical protein-1e-35At5g23300PYRD (pyrimidine d)O.I.H.G.S.X.
0.4067.00.95PtpAffx.213661.1.S1_atpmrna26675hypothetical protein-2e-10At3g51770ETO1 (ETHYLENE OVERPRODUCER 1)O.I.H.G.S.X.
0.3964.60.93PtpAffx.65890.1.S1_s_atCN523643hypothetical protein-5e-4At4g18070unknown proteinO.I.H.G.S.X.
0.3762.30.95Ptp.5517.3.A1_atCV226502hypothetical protein-5e-19At3g23980unknown proteinO.I.H.G.S.X.
0.3762.30.91PtpAffx.121088.2.A1_atCV278956--4e-4At1g80760NIP6O.I.H.G.S.X.
0.3762.30.92PtpAffx.204982.1.S1_s_atpmrna9866hypothetical protein-3e-12At5g59790unknown proteinO.I.H.G.S.X.
0.3559.70.93PtpAffx.137281.1.S1_atCV235386--2e-47At2g18460LCV3 (like cov 3)O.I.H.G.S.X.
0.3559.70.94PtpAffx.221300.1.S1_s_atpmrna38086calcium dependent protein kinase 11 /// calcium dependent protein kinase 4 /// hypothetical protein-3e-63At4g09570CPK4O.I.H.G.S.X.
0.3559.70.93PtpAffx.209995.1.S1_atpmrna19718hypothetical protein-9e-84At5g54310AGD5 (ARF-GAP domain 5)O.I.H.G.S.X.
0.3559.70.93PtpAffx.12640.1.A1_atCV240965hypothetical protein-2e-148At3g20290ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)O.I.H.G.S.X.
0.3458.30.94PtpAffx.29775.1.S1_a_atCV282899hypothetical protein-8e-50At3g48790serine C-palmitoyltransferase, putativeO.I.H.G.S.X.
0.3458.30.96PtpAffx.201782.1.S1_s_atpmrna3552hypothetical protein-2e-74At4g09810transporter-relatedO.I.H.G.S.X.
0.3458.30.92PtpAffx.200762.1.S1_atpmrna1477metal tolerance protein-2e-6At2g29410MTPB1 (METAL TOLERANCE PROTEIN B1)O.I.H.G.S.X.
0.3458.30.93PtpAffx.120529.1.A1_s_atCV275657hypothetical protein-2e-7At1g72170unknown proteinO.I.H.G.S.X.
0.3357.50.94PtpAffx.2394.1.A1_s_atCX659431hypothetical protein-2e-45At1g33170dehydration-responsive family proteinO.I.H.G.S.X.
0.3357.50.95PtpAffx.140896.1.A1_s_atCV266164hypothetical protein-1e-9At5g15530BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2)O.I.H.G.S.X.
0.3357.50.93Ptp.37.1.S1_atCA929635hypothetical protein-9e-12At4g17890AGD8 (ARF-GAP DOMAIN 8)O.I.H.G.S.X.
0.3255.20.94PtpAffx.101307.1.A1_atCV261304hypothetical protein-3e-8At4g14950unknown proteinO.I.H.G.S.X.
0.3052.00.94PtpAffx.142301.1.S1_s_atCK103416hypothetical protein-5e-24At3g10370SDP6 (SUGAR-DEPENDENT 6)O.I.H.G.S.X.
0.3052.00.94PtpAffx.14302.1.S1_atCV256500hypothetical protein-2e-1At3g11330leucine-rich repeat family proteinO.I.H.G.S.X.
0.2950.50.94PtpAffx.78476.1.A1_atDN492751hypothetical protein-1e-4At2g03690coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family proteinO.I.H.G.S.X.
0.2950.50.92PtpAffx.202674.1.S1_s_atpmrna5332hypothetical protein-5e-11At3g25030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2950.50.93PtpAffx.150652.1.S1_atCK106078hypothetical protein-6e-21At4g36940NAPRT1 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 1)O.I.H.G.S.X.
0.2950.50.95PtpAffx.7974.1.S1_atCA924099hypothetical protein-5e-19At2g20900diacylglycerol kinase, putativeO.I.H.G.S.X.
0.2747.10.91PtpAffx.203080.1.S1_atpmrna6095hypothetical protein-3e-24At3g51470protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2645.20.92Ptp.2292.1.A1_atCV232695hypothetical protein-4e-125At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)O.I.H.G.S.X.
0.2238.30.94Ptp.1593.1.A1_s_atCV234995hypothetical protein-5e-3At2g40710-O.I.H.G.S.X.
0.2034.60.95Ptp.6508.1.S1_atCV259562hypothetical protein-2e-59At3g55530SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1)O.I.H.G.S.X.
0.1423.50.95PtpAffx.201426.1.S1_s_atpmrna2818hypothetical protein-3e-53At4g10440dehydration-responsive family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.996.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.482.3GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.381.0GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage