Co-expression analysis

Gene ID	PtpAffx.60647.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g58440: XF1 (HF=3e-55)
Module size	6 genes
NF	0.36
%ile	62.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	92.6	0.95	PtpAffx.60647.1.S1_at	CV266317	hypothetical protein	-	3e-55	At1g58440	XF1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.95	PtpAffx.210274.1.S1_at	pmrna20208	hypothetical protein	-	3e-12	At3g49200	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.32	55.2	0.95	PtpAffx.9749.1.A1_at	DN491489	hypothetical protein	-	4e+0	At5g04790	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	0.95	PtpAffx.54796.1.S1_at	DN497368	aminophospholipid ATPase /// aminophospholipid ATPase	-	3e-1	At1g47970	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.24	41.8	0.95	PtpAffx.203194.1.S1_s_at	pmrna6331	hypothetical protein	-	3e-5	At2g45430	DNA-binding protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.20	34.6	0.95	PtpAffx.225008.1.S1_at	pmrna43994	hypothetical protein	-	2e+0	At5g65580	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	96.2	GSM244440	Mixed infected tissue, biological rep2	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.3	95.8	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.9	95.1	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.2	93.5	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.0	92.9	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.5	90.9	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM362887	Clone1979_LPI5_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.3	89.8	GSM328562	Populus x canescens root hypoxia_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM328533	Populus x canescens root hypoxia_rep_03	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.0	88.0	GSM328532	Populus x canescens root hypoxia_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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