Co-expression analysis

Gene ID PtpAffx.6053.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g07830: AtGUS2 (Arabidopsis thaliana glucuronidase 2) (HF=9e-21)
Module size 6 genes
NF 0.31
%ile 55.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7794.90.94PtpAffx.6053.1.S1_s_atCN520953hypothetical protein-9e-21At5g07830AtGUS2 (Arabidopsis thaliana glucuronidase 2)O.I.H.G.S.X.
0.5582.20.95PtpAffx.21989.1.A1_a_atCV242525--7e-6At4g31810enoyl-CoA hydratase/isomerase family proteinO.I.H.G.S.X.
0.2950.50.95PtpAffx.9948.1.S1_atBP936434hypothetical protein-9e-7At2g16770DNA binding / transcription factorO.I.H.G.S.X.
0.2340.50.95PtpAffx.206463.1.S1_atpmrna12817hypothetical protein-6e-10At3g58530F-box family protein-relatedO.I.H.G.S.X.
0.1932.70.95PtpAffx.390.5.S1_atBU895968hypothetical protein-3e-47At1g63690protease-associated (PA) domain-containing proteinO.I.H.G.S.X.
0.1525.30.95PtpAffx.144134.1.S1_a_atCV241139hypothetical protein-5e-17At5g61240protein bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.894.9GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.092.9GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.188.6GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.088.0GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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