Co-expression analysis

Gene ID	PtpAffx.59972.2.S1_a_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g48160: signal recognition particle 19 kDa protein, putative / SRP19, putative (HF=2e-9)
Module size	7 genes
NF	0.39
%ile	66.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	94.1	0.96	PtpAffx.59972.2.S1_a_at	CX169696	hypothetical protein	-	2e-9	At1g48160	signal recognition particle 19 kDa protein, putative / SRP19, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.96	PtpAffx.126565.1.S1_at	CV228828	hypothetical protein	-	8e-15	At1g78895	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.97	PtpAffx.30919.1.A1_s_at	CV256221	hypothetical protein	-	1e-16	At1g71270	POK (POKY POLLEN TUBE)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.43	69.7	0.96	PtpAffx.7001.1.S1_s_at	CK319400	hypothetical protein	-	2e+0	At2g34570	MEE21 (maternal effect embryo arrest 21)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.43	69.7	0.96	PtpAffx.2885.1.S1_at	CV271712	hypothetical protein	-	9e-49	At5g10780	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.96	PtpAffx.119807.1.S1_a_at	CX655063	hypothetical protein	-	7e-16	At1g48550	vacuolar protein sorting-associated protein 26 family protein / VPS26 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.20	34.6	0.96	PtpAffx.48817.3.S1_a_at	CV262816	hypothetical protein	-	5e-101	At3g14100	oligouridylate-binding protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	91.3	GSM328560	Populus x canescens root control_rep_11	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM328285	Populus x canescens root control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM328559	Populus x canescens root control_rep_10	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM328557	Populus x canescens root control_rep_08	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM328534	Populus x canescens root control_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.3	89.8	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM328567	Populus x canescens root hypoxia_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM328277	Populus x canescens root control_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM328565	Populus x canescens root hypoxia_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM328558	Populus x canescens root control_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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