Co-expression analysis

Gene ID PtpAffx.59655.1.S1_at
Gene name integral membrane single C2 domain protein
Homology with ArabidopsisSimilar to At5g37220: zinc finger (C3HC4-type RING finger) family protein (HF=5e+0)
Module size 10 genes
NF 0.24
%ile 43.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7594.10.93PtpAffx.59655.1.S1_atDN488428integral membrane single C2 domain protein-5e+0At5g37220zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4369.70.96Ptp.878.1.S1_atCV243532hypothetical protein-2e-27At3g61710autophagy protein Apg6 familyO.I.H.G.S.X.
0.3559.70.96PtpAffx.43400.2.A1_atCV228730--2e-10At5g27030TPR3 (TOPLESS-RELATED 3)O.I.H.G.S.X.
0.3153.70.96PtpAffx.217035.1.S1_s_atpmrna32151hypothetical protein-1e-7At1g72390unknown proteinO.I.H.G.S.X.
0.2340.50.96Ptp.4479.1.S1_atBU825072hypothetical protein-3e-14At3g05090transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2034.60.95PtpAffx.5714.1.S1_atCV258778hypothetical protein-2e-31At2g35680dual specificity protein phosphatase family proteinO.I.H.G.S.X.
0.2034.60.95Ptp.1600.1.A1_s_atCK092016chromatin remodeling complex subunit-5e-23At5g14170CHC1O.I.H.G.S.X.
0.1830.80.95PtpAffx.206675.1.S1_atpmrna13244hypothetical protein-5e-19At5g11910esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.1626.90.95PtpAffx.209023.1.S1_s_atpmrna17873hypothetical protein-3e-7At1g69060heat shock protein bindingO.I.H.G.S.X.
0.1321.60.95PtpAffx.202997.1.S1_atpmrna5928hypothetical protein-6e-101At3g14270phosphatidylinositol-4-phosphate 5-kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.791.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.684.5GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.583.5GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.583.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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