Co-expression analysis

Gene ID PtpAffx.5931.1.A1_a_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g48950: thioesterase family protein (HF=1e-1)
Module size 7 genes
NF 0.20
%ile 37.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4875.40.90PtpAffx.5931.1.A1_a_atAJ779880hypothetical protein-1e-1At5g48950thioesterase family proteinO.I.H.G.S.X.
0.4774.60.90PtpAffx.209318.1.S1_atpmrna18412hypothetical protein-5e-35At2g39830DAR2 (DA1-RELATED PROTEIN 2)O.I.H.G.S.X.
0.2747.10.92PtpAffx.151315.1.S1_atBU881641hypothetical protein-6e-9At2g48020sugar transporter, putativeO.I.H.G.S.X.
0.2645.20.91PtpAffx.35226.1.S1_atCV274935hypothetical protein-1e-7At5g58090glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.1932.70.91PtpAffx.3955.2.S1_atBU881273hypothetical protein-2e-2At3g54240hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.1321.60.91PtpAffx.222439.1.S1_atpmrna39840aldehyde oxidase 2-1e-26At1g04580AAO4 (ARABIDOPSIS ALDEHYDE OXIDASE 4)O.I.H.G.S.X.
0.0711.60.91PtpAffx.220066.1.S1_atpmrna36353hypothetical protein-2e-42At4g17770ATTPS5O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.096.6GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.694.5GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.791.8GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.987.2GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.785.5GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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