Co-expression analysis

Gene ID PtpAffx.58971.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g73940: unknown protein (HF=4e-7)
Module size 6 genes
NF 0.69
%ile 95.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.97PtpAffx.58971.1.S1_atCV252610hypothetical protein-4e-7At1g73940unknown proteinO.I.H.G.S.X.
0.8096.00.98Ptp.5838.1.S1_s_atCV249962hypothetical protein-1e-44At4g2709060S ribosomal protein L14 (RPL14B)O.I.H.G.S.X.
0.6791.10.98Ptp.1555.1.S1_atCV263349hypothetical protein-7e-31At3g1095060S ribosomal protein L37a (RPL37aB)O.I.H.G.S.X.
0.6187.00.97Ptp.5313.1.S1_s_atCV271129hypothetical protein-6e-16At3g4991060S ribosomal protein L26 (RPL26A)O.I.H.G.S.X.
0.5784.20.97Ptp.1424.1.S1_s_atCV250396hypothetical protein-3e-14At3g2223060S ribosomal protein L27 (RPL27B)O.I.H.G.S.X.
0.4471.90.98Ptp.1555.1.S1_x_atCV263349hypothetical protein-7e-31At3g1095060S ribosomal protein L37a (RPL37aB)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.794.7GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.393.7GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.590.9GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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