Co-expression analysis

Gene ID PtpAffx.57260.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g11545: xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative (HF=7e-13)
Module size 6 genes
NF 0.36
%ile 62.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6086.00.86PtpAffx.57260.1.S1_atCV232927--7e-13At1g11545xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeO.I.H.G.S.X.
0.4471.90.87PtpAffx.36865.1.A1_atCV253529fasciclin-like arabinogalactan protein 9.2-7e-3At2g20520FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6)O.I.H.G.S.X.
0.4268.60.89PtpAffx.201317.1.S1_atpmrna2619hypothetical protein-8e-49At3g58120BZIP61O.I.H.G.S.X.
0.4067.00.84PtpAffx.149928.1.S1_atBU890641tubulin, beta chain-2e-48At5g12250TUB6 (BETA-6 TUBULIN)O.I.H.G.S.X.
0.3357.50.86PtpAffx.29105.1.S1_atCV244552hypothetical protein-1e-1At1g58460unknown proteinO.I.H.G.S.X.
0.1423.50.86PtpAffx.222942.1.S1_atpmrna40676hypothetical protein-3e+0At5g42895-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.796.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.293.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.791.8GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.389.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.289.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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