Co-expression analysis

Gene ID	PtpAffx.57191.1.A1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g25020: unknown protein (HF=8e+0)
Module size	7 genes
NF	0.47
%ile	76.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	94.9	0.95	PtpAffx.57191.1.A1_at	CV276610	hypothetical protein	-	8e+0	At5g25020	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	0.95	PtpAffx.4886.1.S1_a_at	CV263548	hypothetical protein	-	1e-6	At2g38780	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.53	80.5	0.96	Ptp.2223.1.S1_at	CK089386	hypothetical protein	-	1e+0	At1g18130	tRNA synthetase-related / tRNA ligase-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.47	74.6	0.95	PtpAffx.113940.1.A1_at	CV277947	hypothetical protein	-	7e-6	At5g11330	monooxygenase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.42	68.6	0.95	PtpAffx.223274.1.S1_s_at	pmrna41189	hypothetical protein	-	3e-46	At2g23390	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.33	57.5	0.96	Ptp.3154.1.S1_at	DN485746	hypothetical protein	-	2e-78	At1g79600	ABC1 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	0.95	PtpAffx.52156.2.A1_a_at	CV270967	-	-	6e-8	At5g03900	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	96.8	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.1	93.2	GSM327398	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM372091	Clone3200_LPI2_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.2	89.3	GSM334224	Populus balsamifera_1006_mature_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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