Co-expression analysis

Gene ID PtpAffx.56923.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g24090: glutamine-fructose-6-phosphate transaminase (isomerizing)/ sugar binding / transaminase (HF=2e-77)
Module size 6 genes
NF 0.72
%ile 97.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7192.60.96PtpAffx.56923.1.S1_atBI123150hypothetical protein-2e-77At3g24090glutamine-fructose-6-phosphate transaminase (isomerizing)/ sugar binding / transaminaseO.I.H.G.S.X.
0.7393.60.97PtpAffx.454.7.A1_s_atCV281713hypothetical protein-2e-100At3g56800CAM3 (CALMODULIN 3)O.I.H.G.S.X.
0.6791.10.96Ptp.348.1.S1_atCV268169hypothetical protein-2e+0At1g31320LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4)O.I.H.G.S.X.
0.6791.10.97PtpAffx.104716.1.S1_a_atCK096563hypothetical protein-3e-8At4g16444unknown proteinO.I.H.G.S.X.
0.6086.00.97Ptp.5782.1.S1_atCV271204hypothetical protein-2e-77At5g47200ATRAB1AO.I.H.G.S.X.
0.5078.60.97PtpAffx.5252.1.A1_atCV259090hypothetical protein-3e-61At3g22845emp24/gp25L/p24 protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.797.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.395.8GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.295.6GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.092.9GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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