Co-expression analysis

Gene ID PtpAffx.55786.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g09510: beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative (HF=5e-35)
Module size 6 genes
NF 0.53
%ile 83.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5380.50.94PtpAffx.55786.1.S1_s_atCA825382hypothetical protein-5e-35At4g09510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeO.I.H.G.S.X.
0.7393.60.95PtpAffx.111048.1.S1_atBU883776hypothetical protein-2e-94At2g22480PFK5 (PHOSPHOFRUCTOKINASE 5)O.I.H.G.S.X.
0.5380.50.95PtpAffx.11524.3.S1_atCV272635hypothetical protein-4e-28At5g23250succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putativeO.I.H.G.S.X.
0.5078.60.96PtpAffx.5890.2.S1_atCF232083hypothetical protein-5e-3At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)O.I.H.G.S.X.
0.4673.70.96PtpAffx.7625.4.S1_a_atCX174671hypothetical protein-5e-24At1g53240malate dehydrogenase (NAD), mitochondrialO.I.H.G.S.X.
0.2543.60.95PtpAffx.4971.2.S1_a_atCV252275hypothetical protein-3e-49At5g08160ATPK3O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.199.0GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
7.498.2GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.596.1GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
3.393.7GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.5062.1.A1_at, orthologous to the query gene, PtpAffx.55786.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8395.6Zm.5062.1.A1_atAt4g09510hypothetical protein LOC100191591-6e-13At1g72000beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeO.I.H.G.S.X.
0.5369.1Zm.12273.1.S1_atAt4g09510hypothetical protein LOC100191433-8e-1At4g31310avirulence-responsive protein-related / avirulence induced gene (AIG) protein-relatedO.I.H.G.S.X.
0.125.9Zm.15683.1.A1_atAt4g09510--2e-2At1g27435unknown proteinO.I.H.G.S.X.
0.094.0Zm.4119.1.S1_atAt4g09510ATP binding protein-2e-4At3g09010protein kinase family proteinO.I.H.G.S.X.
0.062.3Zm.6071.1.A1_atAt4g09510--4e-5At2g45620nucleotidyltransferase family proteinO.I.H.G.S.X.
0.062.3Zm.4320.1.A1_atAt4g09510hypothetical protein LOC100276939-5e+0At5g02502unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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