Co-expression analysis

Gene ID PtpAffx.5471.2.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g09640: APX2 (ASCORBATE PEROXIDASE 2) (HF=4e-13)
Module size 9 genes
NF 0.32
%ile 56.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7091.70.88PtpAffx.5471.2.A1_atCV246054--4e-13At3g09640APX2 (ASCORBATE PEROXIDASE 2)O.I.H.G.S.X.
0.4774.60.91PtpAffx.18964.1.A1_atCV227265NAC domain protein, IPR003441-4e-2At2g04560transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.4369.70.91PtpAffx.211391.1.S1_atpmrna22327hypothetical protein-8e-2At4g00770unknown proteinO.I.H.G.S.X.
0.4067.00.91PtpAffx.205565.1.S1_atpmrna11000--6e-9At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)O.I.H.G.S.X.
0.3863.70.89PtpAffx.38073.1.A1_atCV249239--1e-3At5g03545unknown proteinO.I.H.G.S.X.
0.2950.50.92PtpAffx.38638.1.S1_atCV261182hypothetical protein-7e-1At1g15390PDF1A (PEPTIDE DEFORMYLASE 1A)O.I.H.G.S.X.
0.2747.10.92PtpAffx.205675.1.S1_atpmrna11207hypothetical protein-9e-1At3g54940-O.I.H.G.S.X.
0.1830.80.91PtpAffx.219531.1.S1_atpmrna35474hypothetical protein-6e-1At4g20870FAH2 (FATTY ACID HYDROXYLASE 2)O.I.H.G.S.X.
0.1423.50.89PtpAffx.204229.1.S1_atpmrna8317hypothetical protein-3e-46At2g21590APL4O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.894.9GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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