| Gene ID | PtpAffx.5423.1.S1_s_at |
| Gene name | hypothetical protein |
| Homology with Arabidopsis | Similar to At4g11820: MVA1 (HF=3e-24) |
| Module size | 6 genes |
| NF | 0.60 |
| %ile | 90.5 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.2 | 0.94 | PtpAffx.5423.1.S1_s_at | CV229504 | hypothetical protein | - | 3e-24 | At4g11820 | MVA1 | O.I. | H.G. | S.X. | |
| 0.83 | 97.0 | 0.94 | Ptp.4515.1.S1_at | CV253179 | hypothetical protein | - | 5e-79 | At5g47770 | FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1) | O.I. | H.G. | S.X. | |
| 0.67 | 91.1 | 0.94 | Ptp.4515.1.S1_s_at | CV253179 | hypothetical protein | - | 5e-79 | At5g47770 | FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1) | O.I. | H.G. | S.X. | |
| 0.59 | 84.9 | 0.94 | PtpAffx.153434.1.A1_s_at | CV264552 | hypothetical protein | - | 2e-37 | At5g47720 | acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative | O.I. | H.G. | S.X. | |
| 0.50 | 78.6 | 0.96 | PtpAffx.147936.1.S1_s_at | BP924717 | hypothetical protein | - | 1e-21 | At5g48230 | ACAT2 (ACETOACETYL-COA THIOLASE 2) | O.I. | H.G. | S.X. | |
| 0.24 | 41.8 | 0.94 | Ptp.6668.1.S1_at | CN523821 | hypothetical protein | - | 4e-38 | At5g48230 | ACAT2 (ACETOACETYL-COA THIOLASE 2) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 9.0 | 98.7 | GSM327407 | Populus balsamifera_1006_root_midday_1 | GSE13990 | Populus balsamifera developmental tissue series | |
| 6.7 | 97.9 | GSM327409 | Populus balsamifera_1006_root_midday_3 | GSE13990 | Populus balsamifera developmental tissue series | |
| 3.7 | 94.7 | GSM327408 | Populus balsamifera_1006_root_midday_2 | GSE13990 | Populus balsamifera developmental tissue series | |
| 3.3 | 93.7 | GSM136938 | Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | |
| 3.0 | 92.9 | GSM327661 | Populus balsamifera_Male_Catkin_midday_3 | GSE13990 | Populus balsamifera developmental tissue series | |
| 1.9 | 87.2 | GSM372096 | Clone3200_LPI5_N-_4w_rep2 | GSE14893 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200 | |
| 1.7 | 85.5 | GSM362883 | Clone1979_LPI2_N+_4w_rep1 | GSE14515 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979 | |
| 1.6 | 84.5 | GSM362888 | Clone1979_LPI5_N+_4w_rep2 | GSE14515 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979 | |
| 1.6 | 84.5 | GSM328284 | Populus x canescens root control_rep_03 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 1.6 | 84.5 | GSM362884 | Clone1979_LPI2_N+_4w_rep2 | GSE14515 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979 | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.71 | 89.6 | Os09g0521400 | At4g11820 | - | Hydroxymethylglutaryl coenzyme A synthase | 8e-26 | At4g11820 | MVA1 | O.I. | H.G. | S.X. | |
| 0.83 | 95.8 | Os09g0297400 | At4g11820 | - | Phosphate/phosphoenolpyruvate translocator | 2e-11 | At5g33320 | CUE1 (CAB UNDEREXPRESSED 1) | O.I. | H.G. | S.X. | |
| 0.75 | 91.9 | Os08g0327400 | At4g11820 | - | Enoyl-[acyl-carrier-protein] reductase [NADH],chloroplast precursor (EC 1.3.1.9) (NADH-dependentenoyl-ACP reductase) | 2e-32 | At2g05990 | MOD1 (MOSAIC DEATH 1) | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | Os09g0252100 | At4g11820 | - | Acetyl-CoA C-acetyltransferase | 2e-35 | At5g48230 | ACAT2 (ACETOACETYL-COA THIOLASE 2) | O.I. | H.G. | S.X. | |
| 0.57 | 77.0 | Os06g0196600 | At4g11820 | - | 3-oxoacyl-[acyl-carrier-protein] synthase I,chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACPsynthase I) (KAS I) | 2e-23 | At5g46290 | KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I) | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | Os08g0431300 | At4g11820 | - | Dihydrolipoamide S-acetyltransferase | 4e-12 | At3g25860 | LTA2 | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | Os06g0104400 | At4g11820 | - | IQ calmodulin-binding region domain containingprotein | 3e-3 | At1g54410 | dehydrin family protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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