| Gene ID | PtpAffx.52716.1.A1_s_at |
| Gene name | hypothetical protein |
| Homology with Arabidopsis | Similar to At5g17380: pyruvate decarboxylase family protein (HF=6e-28) |
| Module size | 6 genes |
| NF | 0.53 |
| %ile | 84.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 91.1 | 0.96 | PtpAffx.52716.1.A1_s_at | CK096645 | hypothetical protein | - | 6e-28 | At5g17380 | pyruvate decarboxylase family protein | O.I. | H.G. | S.X. | |
| 0.63 | 88.1 | 0.97 | PtpAffx.42410.1.S1_s_at | BP922740 | hypothetical protein | - | 1e-20 | At1g64140 | - | O.I. | H.G. | S.X. | |
| 0.61 | 87.0 | 0.97 | PtpAffx.42410.1.S1_at | BP922740 | hypothetical protein | - | 1e-20 | At1g64140 | - | O.I. | H.G. | S.X. | |
| 0.46 | 73.7 | 0.97 | PtpAffx.131455.1.S1_s_at | CK102810 | hypothetical protein | - | 7e-39 | At4g02570 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) | O.I. | H.G. | S.X. | |
| 0.38 | 63.7 | 0.97 | Ptp.5819.1.S1_at | CK114175 | hypothetical protein | - | 3e-18 | At5g59420 | ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C) | O.I. | H.G. | S.X. | |
| 0.33 | 57.5 | 0.97 | PtpAffx.116322.1.S1_at | CK106873 | histone acetyltransferase /// histone acetyltransferase | - | 1e-34 | At1g79000 | HAC1 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 3.2 | 93.5 | GSM372098 | Clone3200_LPI5_N-_8w_rep2 | GSE14893 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200 | |
| 3.1 | 93.2 | GSM334225 | Populus balsamifera_1006_mature_leaf_midday_2 | GSE13990 | Populus balsamifera developmental tissue series | |
| 3.0 | 92.9 | GSM327404 | Populus balsamifera_1006_young_leaf_midday_1 | GSE13990 | Populus balsamifera developmental tissue series | |
| 2.4 | 90.4 | GSM244436 | Mmd infected tissue, biological rep1 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| 2.3 | 89.8 | GSM244438 | Mmd infected tissue, biological rep3 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| 2.3 | 89.8 | GSM244433 | Mlp infected tissue, biological rep1 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| 2.2 | 89.3 | GSM244431 | non infected tissue, biological rep2 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| 2.1 | 88.6 | GSM244441 | Mixed infected tissue, biological rep3 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| 2.1 | 88.6 | GSM244435 | Mlp infected tissue, biological rep3 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| 2.0 | 88.0 | GSM244440 | Mixed infected tissue, biological rep2 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 91.1 | Os01g0505400 | At5g17380 | - | Pyruvate decarboxylase family protein | 2e-10 | At5g17380 | pyruvate decarboxylase family protein | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os06g0644200 | At5g17380 | - | Vacuolar H+-pyrophosphatase (EC 3.6.1.1) | 9e-175 | At1g15690 | AVP1 | O.I. | H.G. | S.X. | |
| 0.63 | 82.7 | Os04g0533300 | At5g17380 | - | Remorin (pp34) | 5e-4 | At5g23750 | remorin family protein | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | Os03g0324300 | At5g17380 | - | EIL3 | 9e-2 | At5g21120 | EIL2 (ETHYLENE-INSENSITIVE3-LIKE 2) | O.I. | H.G. | S.X. | |
| 0.27 | 27.5 | Os02g0182800 | At5g17380 | - | Homeodomain transcription factor KNAT7 | 4e-27 | At5g11060 | KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4) | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os05g0409300 | At5g17380 | - | Cysteine protease inhibitor cystatin (Fragment) | 2e+0 | At2g20260 | PSAE-2 (photosystem I subunit E-2) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
Back to the CoP portal site
Back to the KAGIANA project homepage