Co-expression analysis

Gene ID PtpAffx.47344.1.S1_at
Gene name white-brown-complex ABC transporter family /// white-brown-complex ABC transporter family
Homology with ArabidopsisSimilar to At1g31770: ABC transporter family protein (HF=1e-48)
Module size 6 genes
NF 0.55
%ile 86.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.94PtpAffx.47344.1.S1_atCK097216white-brown-complex ABC transporter family /// white-brown-complex ABC transporter family-1e-48At1g31770ABC transporter family proteinO.I.H.G.S.X.
0.6791.10.95PtpAffx.208025.1.S1_atpmrna15931hypothetical protein-4e-10At1g67030ZFP6 (ZINC FINGER PROTEIN 6)O.I.H.G.S.X.
0.6791.10.96PtpAffx.212396.1.S1_atpmrna24286hypothetical protein-7e-10At1g71870MATE efflux family proteinO.I.H.G.S.X.
0.6086.00.93Ptp.7995.1.S1_atDN503291hypothetical protein-5e-1At3g19320leucine-rich repeat family proteinO.I.H.G.S.X.
0.5784.20.94PtpAffx.162571.1.A1_atCV253632--3e-12At4g14465DNA-binding protein-relatedO.I.H.G.S.X.
0.2441.80.94PtpAffx.211007.1.S1_atpmrna21629hypothetical protein-1e-5At3g04570DNA-binding protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.597.1GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.092.9GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.992.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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