Co-expression analysis

Gene ID PtpAffx.46615.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g59860: 17.6 kDa class I heat shock protein (HSP17.6A-CI) (HF=9e-2)
Module size 8 genes
NF 0.01
%ile 1.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.2850.50.71PtpAffx.46615.1.S1_atCV277944hypothetical protein-9e-2At1g5986017.6 kDa class I heat shock protein (HSP17.6A-CI)O.I.H.G.S.X.
0.046.90.74PtpAffx.210345.1.S1_x_atpmrna20339hypothetical protein-2e-10At4g27680MSP1 protein, putative / intramitochondrial sorting protein, putativeO.I.H.G.S.X.
0.046.90.77PtpAffx.221390.1.S1_x_atpmrna38261hypothetical protein-2e+0At5g01750unknown proteinO.I.H.G.S.X.
0.035.20.75PtpAffx.200987.1.S1_s_atpmrna1942hypothetical protein-3e+0At3g52150RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.035.20.77PtpAffx.121523.1.A1_atCV236632--2e+0At1g49610F-box family proteinO.I.H.G.S.X.
0.012.20.74PtpAffx.207048.1.S1_atpmrna13962hypothetical protein-2e+0At2g36930zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
-0.40.71PtpAffx.209174.1.S1_atpmrna18161--1e+0At1g08845structural constituent of ribosomeO.I.H.G.S.X.
-0.40.71PtpAffx.114237.1.A1_atCV266144--8e-1At3g51680short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.997.4GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.796.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.696.2GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.785.5GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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