Co-expression analysis

Gene ID	PtpAffx.4559.2.A1_x_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g15780: pollen Ole e 1 allergen and extensin family protein (HF=1e-7)
Module size	6 genes
NF	0.04
%ile	9.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	83.9	0.86	PtpAffx.4559.2.A1_x_at	CV273877	hypothetical protein	-	1e-7	At5g15780	pollen Ole e 1 allergen and extensin family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.13	21.6	0.86	PtpAffx.4559.1.A2_s_at	CV257005	hypothetical protein	-	2e-7	At5g15780	pollen Ole e 1 allergen and extensin family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.11	18.1	0.87	PtpAffx.221784.1.S1_at	pmrna38836	hypothetical protein	-	3e-1	At1g14900	HMGA (HIGH MOBILITY GROUP A)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.03	5.2	0.87	PtpAffx.24990.1.A1_at	CV235351	-	-	1e-13	At3g48110	EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.03	5.2	0.85	Ptp.4163.1.S1_s_at	CV278047	aquaporin, MIP family, TIP subfamily	-	2e-10	At2g36830	GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.88	PtpAffx.163438.1.S1_at	CX174311	hypothetical protein	-	2e+0	At4g13040	AP2 domain-containing transcription factor family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	96.4	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.5	96.1	GSM362885	Clone1979_LPI2_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.2	93.5	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.0	92.9	GSM362886	Clone1979_LPI2_N-_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.8	92.1	GSM362889	Clone1979_LPI5_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.7	91.8	GSM362883	Clone1979_LPI2_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.6	91.3	GSM327403	Populus balsamifera_20071015_Etiolated_seedling_6d_3	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327380	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM362884	Clone1979_LPI2_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.0	88.0	GSM362887	Clone1979_LPI5_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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