Co-expression analysis

Gene ID PtpAffx.44523.1.S1_a_at
Gene name thioredoxin h
Homology with ArabidopsisSimilar to At1g59730: ATH7 (thioredoxin H-type 7) (HF=8e-2)
Module size 14 genes
NF 0.21
%ile 38.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6891.30.83PtpAffx.44523.1.S1_a_atCV228960thioredoxin h-8e-2At1g59730ATH7 (thioredoxin H-type 7)O.I.H.G.S.X.
0.3357.50.92PtpAffx.249.493.S1_atCX180980hypothetical protein-3e-14At4g37470hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.3255.20.89PtpAffx.203712.1.S1_atpmrna7348hypothetical protein-2e-1At5g23100unknown proteinO.I.H.G.S.X.
0.3255.20.91PtpAffx.221313.1.S1_s_atpmrna38109hypothetical protein-4e-1At3g58990aconitase C-terminal domain-containing proteinO.I.H.G.S.X.
0.2543.60.95PtpAffx.249.568.S1_atCV284031--8e-18At4g37470hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.2441.80.93PtpAffx.203312.1.S1_atpmrna6574hypothetical protein-3e-7At4g24010ATCSLG1O.I.H.G.S.X.
0.2340.50.90PtpAffx.200954.1.S1_atpmrna1871hypothetical protein-8e-6At5g14860transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.2340.50.92PtpAffx.32068.1.S1_atCV260347--2e-9At2g36630unknown proteinO.I.H.G.S.X.
0.2136.50.89PtpAffx.208212.1.S1_atpmrna16341hypothetical protein-1e-19At2g05620PGR5 (proton gradient regulation 5)O.I.H.G.S.X.
0.2034.60.92PtpAffx.49277.1.A1_atCV241164hypothetical protein-5e-26At2g25280-O.I.H.G.S.X.
0.1729.10.91Ptp.6858.1.S1_atCA824236hypothetical protein-1e+0At3g56290unknown proteinO.I.H.G.S.X.
0.1423.50.90PtpAffx.220041.1.S1_atpmrna36305hypothetical protein-1e-14At4g17970unknown proteinO.I.H.G.S.X.
0.1118.10.89PtpAffx.77210.1.S1_atAJ774701hypothetical protein-2e-3At1g51550F-box family proteinO.I.H.G.S.X.
0.069.80.88Ptp.5123.1.S1_s_atBI123501hypothetical protein-2e-71At3g07700ABC1 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.594.3GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.293.5GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.490.4GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.389.8GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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