| Gene ID | PtpAffx.43837.1.A1_s_at |
| Gene name | hypothetical protein |
| Homology with Arabidopsis | Similar to At4g24026: unknown protein (HF=3e-6) |
| Module size | 6 genes |
| NF | 0.05 |
| %ile | 10.5 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.46 | 73.7 | 0.90 | PtpAffx.43837.1.A1_s_at | CV256587 | hypothetical protein | - | 3e-6 | At4g24026 | unknown protein | O.I. | H.G. | S.X. | |
| 0.36 | 61.6 | 0.92 | PtpAffx.8523.2.S1_a_at | BI069505 | hypothetical protein | - | 4e-32 | At5g56530 | unknown protein | O.I. | H.G. | S.X. | |
| 0.29 | 50.5 | 0.92 | PtpAffx.128165.1.A1_a_at | CV241610 | hypothetical protein | - | 1e+0 | At1g76930 | ATEXT4 (EXTENSIN 4) | O.I. | H.G. | S.X. | |
| 0.14 | 23.5 | 0.90 | PtpAffx.206196.1.S1_at | pmrna12304 | hypothetical protein | - | 4e-19 | At2g19090 | unknown protein | O.I. | H.G. | S.X. | |
| 0.10 | 16.3 | 0.92 | PtpAffx.254.1.S1_s_at | CV268035 | hypothetical protein | - | 1e-20 | At2g47115 | unknown protein | O.I. | H.G. | S.X. | |
| 0.01 | 2.2 | 0.89 | PtpAffx.30944.1.A1_at | CV246079 | hypothetical protein | - | 4e-22 | At4g35490 | MRPL11 (MITOCHONDRIAL RIBOSOMAL PROTEIN L11) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 3.5 | 94.3 | GSM362887 | Clone1979_LPI5_N+_4w_rep1 | GSE14515 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979 | |
| 2.3 | 89.8 | GSM327358 | Populus balsamifera_20071015_Seedling_continuous_light_6d_2 | GSE13990 | Populus balsamifera developmental tissue series | |
| 2.3 | 89.8 | GSM327404 | Populus balsamifera_1006_young_leaf_midday_1 | GSE13990 | Populus balsamifera developmental tissue series | |
| 2.1 | 88.6 | GSM327409 | Populus balsamifera_1006_root_midday_3 | GSE13990 | Populus balsamifera developmental tissue series | |
| 1.9 | 87.2 | GSM362888 | Clone1979_LPI5_N+_4w_rep2 | GSE14515 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979 | |
| 1.9 | 87.2 | GSM372096 | Clone3200_LPI5_N-_4w_rep2 | GSE14893 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200 | |
| 1.9 | 87.2 | GSM372094 | Clone3200_LPI5_N+_4w_rep2 | GSE14893 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200 | |
| 1.8 | 86.4 | GSM327660 | Populus balsamifera_Male_Catkin_midday_2 | GSE13990 | Populus balsamifera developmental tissue series | |
| 1.7 | 85.5 | GSM327661 | Populus balsamifera_Male_Catkin_midday_3 | GSE13990 | Populus balsamifera developmental tissue series | |
| 1.7 | 85.5 | GSM244431 | non infected tissue, biological rep2 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.9 | Os10g0431200 | At4g24026 | - | - | 4e+0 | At1g68680 | unknown protein | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os01g0496300 | At4g24026 | - | - | 9e+0 | At3g43430 | zinc finger (C3HC4-type RING finger) family protein | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os11g0154200 | At4g24026 | - | - | 5e-5 | At1g54200 | unknown protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os01g0195700 | At4g24026 | - | Basic helix-loop-helix dimerisation region bHLHdomain containing protein | 2e+0 | At3g02860 | zinc ion binding | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os09g0368400 | At4g24026 | - | - | 4e-1 | At5g02440 | unknown protein | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os11g0577200 | At4g24026 | - | - | 1e+0 | At5g63000 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
Back to the CoP portal site
Back to the KAGIANA project homepage