Co-expression analysis

Gene ID PtpAffx.43347.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g10950: 60S ribosomal protein L37a (RPL37aB) (HF=2e+0)
Module size 6 genes
NF 0.25
%ile 45.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6388.10.80PtpAffx.43347.1.A1_atCV275802--2e+0At3g1095060S ribosomal protein L37a (RPL37aB)O.I.H.G.S.X.
0.4067.00.82PtpAffx.221080.1.S1_atpmrna37660hypothetical protein-2e+0At5g53730harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.2340.50.80PtpAffx.218436.1.S1_atpmrna34046hypothetical protein-1e+0At4g16807unknown proteinO.I.H.G.S.X.
0.2136.50.81PtpAffx.95504.1.A1_atCV243577--3e+0At3g57958unknown proteinO.I.H.G.S.X.
0.1525.30.80PtpAffx.34889.1.S1_atCK104517--1e+1At4g15750invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.1525.30.80PtpAffx.67757.1.A1_atDN484975--8e-1At4g01460basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.098.4GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
7.698.3GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.096.6GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.794.7GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.494.0GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.791.8GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.691.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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