Co-expression analysis

Gene ID PtpAffx.4328.1.S1_a_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g56700: pyrrolidone-carboxylate peptidase family protein (HF=1e-5)
Module size 8 genes
NF 0.26
%ile 47.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6388.10.92PtpAffx.4328.1.S1_a_atCX180970hypothetical protein-1e-5At1g56700pyrrolidone-carboxylate peptidase family proteinO.I.H.G.S.X.
0.4673.70.92PtpAffx.19734.2.A1_atCV248852--1e+0At5g26990drought-responsive family proteinO.I.H.G.S.X.
0.4369.70.91PtpAffx.135298.1.A1_atCV232578hypothetical protein-1e+0At1g16490MYB58 (MYB DOMAIN PROTEIN 58)O.I.H.G.S.X.
0.3863.70.92PtpAffx.73309.1.S1_a_atCV253817hypothetical protein-3e-11At2g22425peptidaseO.I.H.G.S.X.
0.1932.70.92Ptp.5415.1.S1_a_atCK099666hypothetical protein-9e-26At1g61700DNA-directed RNA polymerase II, putative (RPB10)O.I.H.G.S.X.
0.1932.70.93PtpAffx.13492.1.S1_atBI126959hypothetical protein-2e-6At1g11170unknown proteinO.I.H.G.S.X.
0.1423.50.93PtpAffx.77528.2.A1_atCV244458hypothetical protein-1e-41At5g06950AHBP-1BO.I.H.G.S.X.
0.1219.60.93PtpAffx.38601.1.A1_atCK318400hypothetical protein-3e-7At3g50500SNRK2.2 (SNF1-RELATED PROTEIN KINASE 2.2)O.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.490.4GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.289.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
1.886.4GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.684.5GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.684.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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