Co-expression analysis

Gene ID	PtpAffx.42648.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g15120: ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative (HF=7e-27)
Module size	6 genes
NF	0.64
%ile	93.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	0.97	PtpAffx.42648.1.S1_at	CV260478	hypothetical protein	-	7e-27	At1g15120	ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.97	PtpAffx.52603.1.S1_s_at	CF236661	hypothetical protein	-	7e-5	At1g51650	ATP synthase epsilon chain, mitochondrial	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.97	PtpAffx.25435.1.A1_x_at	CV233869	hypothetical protein	-	2e+0	At5g43460	lesion inducing protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.97	Ptp.7565.1.S1_at	CV269696	hypothetical protein	-	1e-7	At4g26210	mitochondrial ATP synthase g subunit family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.98	Ptp.4601.1.S1_at	CV256279	hypothetical protein	-	2e-37	At2g31490	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.97	PtpAffx.249.105.A1_at	CV283073	hypothetical protein	-	0	At5g08680	ATP synthase beta chain, mitochondrial, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.0	96.6	GSM362883	Clone1979_LPI2_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.7	94.7	GSM362885	Clone1979_LPI2_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.5	94.3	GSM362884	Clone1979_LPI2_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.9	92.5	GSM328063	Populus x canescens leaf control_rep_03	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.8	92.1	GSM372093	Clone3200_LPI5_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.5	90.9	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM362887	Clone1979_LPI5_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.3	89.8	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.1	88.6	GSM327380	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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