Co-expression analysis

Gene ID PtpAffx.39908.3.S1_a_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g10430: PP2A-2 (HF=1e-71)
Module size 7 genes
NF 0.52
%ile 83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6388.10.96PtpAffx.39908.3.S1_a_atCX176310hypothetical protein-1e-71At1g10430PP2A-2O.I.H.G.S.X.
0.6388.10.96PtpAffx.136990.1.S1_atBU885285--1e-19At1g72880acid phosphatase survival protein SurE, putativeO.I.H.G.S.X.
0.6086.00.97PtpAffx.129212.1.S1_atBP929522hypothetical protein-1e+0At5g11412nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.5380.50.97Ptp.7424.1.S1_atBU861469hypothetical protein-7e-52At1g12840DET3 (DE-ETIOLATED 3)O.I.H.G.S.X.
0.3863.70.97PtpAffx.78955.1.S1_atBU876794hypothetical protein-6e-55At4g24550clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.3357.50.97PtpAffx.138176.1.S1_s_atBU883966hypothetical protein-7e-5At2g17720oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.2747.10.97PtpAffx.79842.1.S1_atBU884342hypothetical protein-6e-9At3g43700ATBPM6 (BTB-POZ and MATH domain 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.289.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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