Co-expression analysis

Gene ID PtpAffx.39826.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g38690: 1-phosphatidylinositol phosphodiesterase-related (HF=5e-8)
Module size 7 genes
NF 0.56
%ile 86.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7192.60.93PtpAffx.39826.1.S1_atCF235440hypothetical protein-5e-8At4g386901-phosphatidylinositol phosphodiesterase-relatedO.I.H.G.S.X.
0.7393.60.94Ptp.3708.1.S1_s_atBU879922hypothetical protein-8e-2At1g27290unknown proteinO.I.H.G.S.X.
0.6086.00.93PtpAffx.26085.1.S1_atBU884670hypothetical protein-7e-78At5g27600LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7)O.I.H.G.S.X.
0.4471.90.95PtpAffx.134863.1.S1_atAJ777732hypothetical protein-9e-51At4g34030MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)O.I.H.G.S.X.
0.4067.00.94PtpAffx.95932.1.A1_atCV262312hypothetical protein-2e-40At4g34030MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)O.I.H.G.S.X.
0.3357.50.94Ptp.3337.1.S1_s_atBU892645hypothetical protein-3e-1At5g56100glycine-rich protein / oleosinO.I.H.G.S.X.
0.3153.70.94PtpAffx.11401.4.A1_s_atCK096815hypothetical protein-7e+0At5g18130unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.495.9GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.886.4GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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