Co-expression analysis

Gene ID PtpAffx.37459.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g30590: WRKY21 (HF=3e-59)
Module size 30 genes
NF 0.25
%ile 45.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.92PtpAffx.37459.1.S1_atCK090406hypothetical protein-3e-59At2g30590WRKY21O.I.H.G.S.X.
0.4572.30.95PtpAffx.56693.1.S1_atCF235424hypothetical protein-2e+0At2g24140unknown proteinO.I.H.G.S.X.
0.3762.30.94PtpAffx.8725.2.A1_atCV232347hypothetical protein-2e+1At5g40530-O.I.H.G.S.X.
0.3559.70.94Ptp.6782.1.S1_atCA824799rna-dependent RNA polymerase-3e-8At3g49500RDR6 (RNA-DEPENDENT RNA POLYMERASE 6)O.I.H.G.S.X.
0.3559.70.96PtpAffx.3521.1.A1_atCV256272hypothetical protein-3e-3At5g13890unknown proteinO.I.H.G.S.X.
0.3357.50.95Ptp.5111.1.S1_atCV226011hypothetical protein-1e-94At3g13670protein kinase family proteinO.I.H.G.S.X.
0.3153.70.96PtpAffx.24154.1.A1_atCV272038hypothetical protein-3e-8At1g27752-O.I.H.G.S.X.
0.3153.70.95PtpAffx.52999.1.S1_atDN502552--3e-2At4g29290LCR26 (Low-molecular-weight cysteine-rich 26)O.I.H.G.S.X.
0.3052.00.95Ptp.2343.1.S1_atCV262958hypothetical protein-1e-23At2g45010unknown proteinO.I.H.G.S.X.
0.2950.50.96PtpAffx.126566.1.S1_atCV265896hypothetical protein-4e-21At2g45260unknown proteinO.I.H.G.S.X.
0.2850.50.95Ptp.1928.1.A1_atCK093091hypothetical protein-9e-9At4g33210F-box family protein (FBL15)O.I.H.G.S.X.
0.2850.50.95PtpAffx.124413.1.S1_s_atCK098584hypothetical protein-4e+0At5g23395-O.I.H.G.S.X.
0.2747.10.96PtpAffx.81667.1.A1_atCV282737hypothetical protein-5e+0At1g68500unknown proteinO.I.H.G.S.X.
0.2441.80.93PtpAffx.105803.2.S1_a_atCV225405hypothetical protein-7e-14At2g35110GRL (GNARLED)O.I.H.G.S.X.
0.2441.80.97Ptp.8.1.A1_s_atCV265826hypothetical protein-3e-12At4g27000ATRBP45CO.I.H.G.S.X.
0.2340.50.95PtpAffx.22863.2.S1_atDN484771hypothetical protein-2e-27At3g48040ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)O.I.H.G.S.X.
0.2340.50.96PtpAffx.16386.1.A1_atCV232368hypothetical protein-1e-1At1g27130ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13)O.I.H.G.S.X.
0.2238.30.96Ptp.3096.1.A1_s_atCV257834hypothetical protein-1e-32At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)O.I.H.G.S.X.
0.2238.30.97PtpAffx.20990.1.S1_s_atCV255803hypothetical protein-5e-42At3g11910UBP13 (UBIQUITIN-SPECIFIC PROTEASE 13)O.I.H.G.S.X.
0.2034.60.94PtpAffx.96776.2.S1_atCK087371hypothetical protein-8e-53At5g05080UBC22 (ubiquitin-conjugating enzyme 22)O.I.H.G.S.X.
0.2034.60.95PtpAffx.85486.1.S1_atDN497315--5e-3At1g16570glycosyl transferase family 1 proteinO.I.H.G.S.X.
0.2034.60.95Ptp.4519.1.S1_s_atCK317966hypothetical protein-5e-29At5g06600UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)O.I.H.G.S.X.
0.2034.60.94Ptp.5435.1.A1_atCV279366hypothetical protein-4e-85At5g17060ATARFB1BO.I.H.G.S.X.
0.1932.70.95PtpAffx.35544.1.S1_atCV233035--6e+0At4g28160hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.1932.70.96Ptp.6468.1.S1_atCX653403hypothetical protein-2e+0At5g55260PPX2 (PROTEIN PHOSPHATASE X 2)O.I.H.G.S.X.
0.1729.10.96Ptp.1505.1.S1_a_atCK092007hypothetical protein-3e-40At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.H.G.S.X.
0.1626.90.96Ptp.4645.1.S1_s_atCV253553--4e-64At3g02260BIG (BIG)O.I.H.G.S.X.
0.1525.30.94Ptp.1346.1.A1_atCV244399hypothetical protein-2e-60At2g38700MVD1 (MEVALONATE DIPHOSPHATE DECARBOXYLASE 1)O.I.H.G.S.X.
0.1423.50.95Ptp.2659.1.A1_s_atCV233487hypothetical protein-6e+0At5g35300unknown proteinO.I.H.G.S.X.
0.1321.60.94PtpAffx.207524.1.S1_s_atpmrna14936aminophospholipid ATPase-8e-49At5g04930ALA1 (aminophospholipid ATPase1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.195.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.583.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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