Co-expression analysis

Gene ID PtpAffx.37401.1.A1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g15750: unknown protein (HF=7e-1)
Module size 15 genes
NF 0.45
%ile 74.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5582.20.82PtpAffx.37401.1.A1_s_atCV253800hypothetical protein-7e-1At3g15750unknown proteinO.I.H.G.S.X.
0.6388.10.90PtpAffx.118679.1.S1_s_atCX169245hypothetical protein-1e-9At4g33050EDA39 (embryo sac development arrest 39)O.I.H.G.S.X.
0.5884.20.89PtpAffx.218377.1.S1_s_atpmrna33971hypothetical protein-9e+0At5g07475plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.5582.20.90PtpAffx.211168.1.S1_atpmrna21956hypothetical protein-1e-30At5g54590protein kinase family proteinO.I.H.G.S.X.
0.5582.20.91PtpAffx.11934.1.S1_atCV130546hypothetical protein-1e-21At4g18950ankyrin protein kinase, putativeO.I.H.G.S.X.
0.5582.20.92PtpAffx.216532.1.S1_s_atpmrna31368hypothetical protein-7e-3At3g09010protein kinase family proteinO.I.H.G.S.X.
0.5178.90.89PtpAffx.505.1.A1_atCV243434hypothetical protein-2e-1At2g23090unknown proteinO.I.H.G.S.X.
0.4875.40.87PtpAffx.42787.1.S1_atCV257284--1e+0At2g30270unknown proteinO.I.H.G.S.X.
0.4673.70.87PtpAffx.224356.1.S1_s_atpmrna42822hypothetical protein-2e-11At1g65800ARK2 (A. THALIANA RECEPTOR KINASE 2)O.I.H.G.S.X.
0.3863.70.93PtpAffx.209733.1.S1_atpmrna19211NBS resistance protein-6e-1At1g29970RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)O.I.H.G.S.X.
0.3661.60.92PtpAffx.225629.1.S1_atpmrna45100hypothetical protein-2e-3At4g23150protein kinase family proteinO.I.H.G.S.X.
0.3559.70.89PtpAffx.90513.2.S1_atCV267118hypothetical protein-2e+0At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.2950.50.92PtpAffx.222493.1.S1_atpmrna39955hypothetical protein-1e-35At2g17220protein kinase, putativeO.I.H.G.S.X.
0.2543.60.90PtpAffx.75349.1.A1_atCV273498--2e+0At4g12720NUDT7O.I.H.G.S.X.
0.1932.70.91PtpAffx.76902.1.S1_atCV274814hypothetical protein-2e-22At5g57700BNR/Asp-box repeat family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.097.5GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
5.697.2GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.796.3GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
3.594.3GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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