Co-expression analysis

Gene ID	PtpAffx.3698.2.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g77610: glucose-6-phosphate/phosphate translocator-related (HF=1e-82)
Module size	8 genes
NF	0.51
%ile	81.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	83.9	0.92	PtpAffx.3698.2.S1_at	BU894200	hypothetical protein	-	1e-82	At1g77610	glucose-6-phosphate/phosphate translocator-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.59	84.9	0.95	PtpAffx.249.708.A1_s_at	CV258093	hypothetical protein	-	1e+1	Atcg00380	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.58	84.2	0.92	PtpAffx.206961.1.S1_at	pmrna13800	hypothetical protein	-	5e-59	At1g05960	binding	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.47	74.6	0.93	PtpAffx.13778.1.S1_a_at	CK091687	hypothetical protein	-	4e-20	At1g17720	ATB BETA	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.95	PtpAffx.4464.1.S1_a_at	CV240296	-	-	2e-7	At4g17720	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.94	PtpAffx.207613.1.S1_at	pmrna15098	hypothetical protein	-	1e-17	At1g67410	exostosin family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.94	PtpAffx.205381.1.S1_at	pmrna10653	hypothetical protein	-	8e-23	At3g50050	aspartyl protease family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.25	43.6	0.95	Ptp.580.1.A1_s_at	CK088984	hypothetical protein	-	5e+0	At5g62998	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	96.2	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.5	90.9	GSM328562	Populus x canescens root hypoxia_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM136938	Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.3	89.8	GSM334225	Populus balsamifera_1006_mature_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM372093	Clone3200_LPI5_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.1	88.6	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM362883	Clone1979_LPI2_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.7	85.5	GSM334226	Populus balsamifera_1006_mature_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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