Co-expression analysis

Gene ID PtpAffx.35119.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g27550: ATC (ARABIDOPSIS THALIANA CENTRORADIALIS) (HF=2e-20)
Module size 6 genes
NF 0.07
%ile 14.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.79PtpAffx.35119.1.S1_atAB181239.1hypothetical protein-2e-20At2g27550ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)O.I.H.G.S.X.
0.6086.00.82Ptp.7731.1.S1_atAB104629.1hypothetical protein-4e-17At2g27550ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)O.I.H.G.S.X.
0.2340.50.89PtpAffx.200243.1.S1_s_atpmrna471glutaredoxin /// glutaredoxin-2e+0At4g33040glutaredoxin family proteinO.I.H.G.S.X.
0.1525.30.84PtpAffx.200243.1.S1_atpmrna471glutaredoxin-2e+0At4g33040glutaredoxin family proteinO.I.H.G.S.X.
0.023.60.87PtpAffx.208494.1.S1_s_atpmrna16869hypothetical protein-4e-2At5g61510NADP-dependent oxidoreductase, putativeO.I.H.G.S.X.
0.023.60.89Ptp.7286.1.S1_atDN492442aquaporin, MIP family, NIP subfamily-3e-63At4g10380NIP5O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.497.0GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.095.3GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.995.1GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.494.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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