Gene ID | PtpAffx.3494.1.S1_at |
Gene name | |
Homology with Arabidopsis | Similar to At4g25510: unknown protein (HF=4e-1) |
Module size | 8 genes |
NF | 0.24 |
%ile | 43.6 |
VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0.61 | 87.0 | 0.85 | PtpAffx.3494.1.S1_at | DN498279 | - | - | 4e-1 | At4g25510 | unknown protein | O.I. | H.G. | S.X. | |
0.40 | 67.0 | 0.90 | PtpAffx.205912.1.S1_at | pmrna11725 | hypothetical protein | - | 2e-2 | At4g00330 | CRCK2 | O.I. | H.G. | S.X. | |
0.36 | 61.6 | 0.89 | PtpAffx.123534.1.S1_s_at | CV240522 | GRAS family transcription factor | - | 4e-1 | At5g41920 | scarecrow transcription factor family protein | O.I. | H.G. | S.X. | |
0.31 | 53.7 | 0.92 | PtpAffx.35765.1.A1_at | BP931605 | hypothetical protein | - | 7e-1 | At2g32350 | - | O.I. | H.G. | S.X. | |
0.17 | 29.1 | 0.88 | Ptp.2645.1.S1_s_at | CV266931 | hypothetical protein | - | 6e-5 | At5g13080 | WRKY75 | O.I. | H.G. | S.X. | |
0.16 | 26.9 | 0.89 | PtpAffx.204955.1.S1_at | pmrna9801 | hypothetical protein | - | 5e-4 | At3g46620 | zinc finger (C3HC4-type RING finger) family protein | O.I. | H.G. | S.X. | |
0.15 | 25.3 | 0.89 | PtpAffx.202451.1.S1_at | pmrna4907 | cc-nbs-lrr resistance protein | - | 1e+0 | At2g18540 | cupin family protein | O.I. | H.G. | S.X. | |
0.13 | 21.6 | 0.86 | PtpAffx.225076.1.S1_at | pmrna44165 | hypothetical protein | - | 1e-1 | At2g17530 | protein kinase family protein | O.I. | H.G. | S.X. |
Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
---|---|---|---|---|---|---|
4.2 | 95.6 | GSM136936 | Poplar in 1 x hrp + 0.25 % sucrose no bacteria | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | ![]() |
4.0 | 95.3 | GSM328483 | Populus x canescens root control_rep_06 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | ![]() |
3.3 | 93.7 | GSM136938 | Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | ![]() |
2.3 | 89.8 | GSM327660 | Populus balsamifera_Male_Catkin_midday_2 | GSE13990 | Populus balsamifera developmental tissue series | ![]() |
2.2 | 89.3 | GSM244430 | non infected tissue, biological rep1 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | ![]() |
2.1 | 88.6 | GSM244437 | Mmd infected tissue, biological rep2 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | ![]() |
2.1 | 88.6 | GSM244432 | non infected tissue, biological rep3 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | ![]() |
2.1 | 88.6 | GSM328484 | Populus x canescens root hypoxia_rep_01 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | ![]() |
2.0 | 88.0 | GSM244436 | Mmd infected tissue, biological rep1 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | ![]() |
1.9 | 87.2 | GSM328566 | Populus x canescens root hypoxia_rep_08 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | ![]() |
Arabidopsis_thaliana |
Glycine_max |
Hordeum_vulgare |
Oryza_sativa |
Triticum_aestivum |
Vitis_vinifera |
Zea_mays |
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