Co-expression analysis

Gene ID PtpAffx.30967.3.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g35710: glycogenin glucosyltransferase (glycogenin)-related (HF=9e-11)
Module size 8 genes
NF 0.58
%ile 88.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4268.60.91PtpAffx.30967.3.S1_atCX187005hypothetical protein-9e-11At2g35710glycogenin glucosyltransferase (glycogenin)-relatedO.I.H.G.S.X.
0.8096.00.95PtpAffx.225314.1.S1_s_atpmrna44575hypothetical protein-2e-4At5g59260lectin protein kinase, putativeO.I.H.G.S.X.
0.7192.60.93PtpAffx.4010.2.A1_a_atCV254509hypothetical protein-9e-8At2g27080harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedO.I.H.G.S.X.
0.6086.00.93PtpAffx.68488.1.A1_atCV241159hypothetical protein-8e-2At2g43230serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.5984.90.94PtpAffx.213398.1.S1_atpmrna26212hypothetical protein-3e-12At3g52450PUB22 (PLANT U-BOX 22)O.I.H.G.S.X.
0.5480.80.93Ptp.3277.1.S1_s_atDN498720hypothetical protein-1e-2At4g39830L-ascorbate oxidase, putativeO.I.H.G.S.X.
0.5078.60.96PtpAffx.201811.1.S1_atpmrna3608hypothetical protein-2e-7At5g64660U-box domain-containing proteinO.I.H.G.S.X.
0.4572.30.93PtpAffx.223981.1.S1_s_atpmrna42208hypothetical protein-2e-1At3g30845unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.195.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.494.0GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.494.0GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.992.5GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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