Co-expression analysis

Gene ID PtpAffx.30879.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g68070: zinc finger (C3HC4-type RING finger) family protein (HF=4e-2)
Module size 14 genes
NF 0.39
%ile 67.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.85PtpAffx.30879.1.A1_atCV258015hypothetical protein-4e-2At1g68070zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6791.10.91PtpAffx.42652.1.S1_atCV268229histone H3-1e-1At1g01370HTR12O.I.H.G.S.X.
0.4268.60.89PtpAffx.7892.4.S1_a_atCV258695hypothetical protein-4e+0At3g17980C2 domain-containing proteinO.I.H.G.S.X.
0.4268.60.90PtpAffx.225505.1.S1_atpmrna44896hypothetical protein-5e-35At2g36400AtGRF3 (GROWTH-REGULATING FACTOR 3)O.I.H.G.S.X.
0.4067.00.86PtpAffx.26228.1.S1_atCK097094AP2/ERF domain-containing transcription factor-2e-2At2g31230ATERF15 (Ethylene-responsive element binding factor 15)O.I.H.G.S.X.
0.3863.70.88PtpAffx.133665.1.A1_atCV267644--9e-1At1g69170squamosa promoter-binding protein-like 6 (SPL6)O.I.H.G.S.X.
0.3661.60.87PtpAffx.208681.1.S1_atpmrna17218hypothetical protein-2e-3At1g10710-O.I.H.G.S.X.
0.3458.30.87PtpAffx.101690.1.A1_atCV255238--9e-1At5g41401unknown proteinO.I.H.G.S.X.
0.3255.20.89PtpAffx.201290.1.S1_atpmrna2561hypothetical protein-7e-16At5g55820unknown proteinO.I.H.G.S.X.
0.3153.70.89PtpAffx.87978.1.S1_s_atCX170242leucine-rich repeat protein kinase-1e-38At5g62230ERL1 (ERECTA-LIKE 1)O.I.H.G.S.X.
0.3052.00.90PtpAffx.29085.1.A1_s_atDN489411--4e+0At1g75700HVA22G (HVA22-LIKE PROTEIN G)O.I.H.G.S.X.
0.2950.50.89PtpAffx.5366.2.A1_atCK090447hypothetical protein-1e-51At1g11750CLPP6O.I.H.G.S.X.
0.2950.50.90Ptp.4172.1.A1_atCV242570hypothetical protein-2e-4At3g61790seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.1729.10.91PtpAffx.25334.2.S1_atCV262387hypothetical protein-1e+1At5g44574unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.293.5GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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