| Gene ID | PtpAffx.30445.2.S1_a_at |
| Gene name | hypothetical protein |
| Homology with Arabidopsis | Similar to At3g18040: MPK9 (MAP KINASE 9) (HF=2e-32) |
| Module size | 6 genes |
| NF | 0.47 |
| %ile | 77.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.77 | 94.9 | 0.90 | PtpAffx.30445.2.S1_a_at | CV275763 | hypothetical protein | - | 2e-32 | At3g18040 | MPK9 (MAP KINASE 9) | O.I. | H.G. | S.X. | |
| 0.50 | 78.6 | 0.90 | PtpAffx.57734.1.S1_at | DN486150 | - | - | 3e-1 | At1g56200 | emb1303 (embryo defective 1303) | O.I. | H.G. | S.X. | |
| 0.50 | 78.6 | 0.93 | PtpAffx.92745.1.S1_at | CK104111 | hypothetical protein | - | 4e-22 | At1g73670 | ATMPK15 | O.I. | H.G. | S.X. | |
| 0.50 | 78.6 | 0.95 | PtpAffx.30445.2.S1_at | CV275763 | hypothetical protein | - | 2e-32 | At3g18040 | MPK9 (MAP KINASE 9) | O.I. | H.G. | S.X. | |
| 0.40 | 67.0 | 0.91 | Ptp.5017.1.S1_at | CV276285 | hypothetical protein | - | 1e-10 | At3g18040 | MPK9 (MAP KINASE 9) | O.I. | H.G. | S.X. | |
| 0.22 | 38.3 | 0.88 | PtpAffx.152452.2.A1_a_at | CV269086 | hypothetical protein | - | 4e-1 | At1g53903 | - | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 3.7 | 94.7 | GSM136938 | Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | |
| 3.5 | 94.3 | GSM372043 | Clone1979_LPI5_N-_8w_rep2 | GSE14515 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979 | |
| 3.1 | 93.2 | GSM136936 | Poplar in 1 x hrp + 0.25 % sucrose no bacteria | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | |
| 3.0 | 92.9 | GSM327380 | Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1 | GSE13990 | Populus balsamifera developmental tissue series | |
| 3.0 | 92.9 | GSM328566 | Populus x canescens root hypoxia_rep_08 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 2.8 | 92.1 | GSM328483 | Populus x canescens root control_rep_06 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 2.8 | 92.1 | GSM372042 | Clone1979_LPI5_N-_8w_rep1 | GSE14515 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979 | |
| 2.6 | 91.3 | GSM328533 | Populus x canescens root hypoxia_rep_03 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 2.6 | 91.3 | GSM327398 | Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3 | GSE13990 | Populus balsamifera developmental tissue series | |
| 2.4 | 90.4 | GSM327400 | Populus balsamifera_20071015_Etiolated_seedling_6d_1 | GSE13990 | Populus balsamifera developmental tissue series | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.93 | 99.2 | Os05g0576800 | At3g18040 | - | MAP kinase homolog | 7e-39 | At3g18040 | MPK9 (MAP KINASE 9) | O.I. | H.G. | S.X. | |
| 0.56 | 76.3 | Os02g0588300 | At3g18040 | - | Fimbrin-like protein (Actin binding motif) | 6e-18 | At4g26700 | ATFIM1 | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os03g0139500 | At3g18040 | - | CONSTANS-like protein CO9 (Fragment) | 3e-3 | At2g33350 | - | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | Os02g0787200 | At3g18040 | - | Protein kinase domain containing protein | 2e-5 | At1g16760 | protein kinase family protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os07g0108400 | At3g18040 | - | GTPase activating protein-like | 2e-1 | At1g23140 | C2 domain-containing protein | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os10g0466500 | At3g18040 | - | CONSTANS-like protein CO9 (Fragment) | 2e-13 | At1g04500 | zinc finger CONSTANS-related | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os11g0689300 | At3g18040 | - | Calmodulin-binding protein MPCBP | 2e-2 | At2g43040 | NPG1 (no pollen germination 1) | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os01g0224700 | At3g18040 | - | Flavin monoxygenase-like protein floozy | 6e-2 | At4g28720 | flavin-containing monooxygenase family protein / FMO family protein | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os04g0604000 | At3g18040 | - | Actin filament bundling protein P-115-ABP | 8e-15 | At4g30160 | VLN4 (ARABIDOPSIS THALIANA VILLIN 4) | O.I. | H.G. | S.X. | |
| 0.28 | 31.1 | Os06g0181500 | At3g18040 | - | Plasma membrane H+-ATPase (EC 3.6.1.3) | 2e-6 | At1g80660 | AHA9 | O.I. | H.G. | S.X. | |
| 0.24 | 22.4 | Os05g0466200 | At3g18040 | - | contains InterPro domain(s): IPR010978, IPR002017 | 9e-2 | At1g58210 | EMB1674 (EMBRYO DEFECTIVE 1674) | O.I. | H.G. | S.X. | |
| 0.20 | 16.5 | Os02g0529500 | At3g18040 | - | SNAP25-like protein C (Fragment) | 1e-1 | At3g48600 | SWIB complex BAF60b domain-containing protein | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os04g0489800 | At3g18040 | - | ARM repeat fold domain containing protein | 2e-3 | At1g24330 | armadillo/beta-catenin repeat family protein / U-box domain-containing family protein | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os12g0633400 | At3g18040 | - | Pathogenesis-related protein PR-1 precursor | 8e-1 | At2g36030 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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