Co-expression analysis

Gene ID PtpAffx.30368.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g76180: ERD14 (EARLY RESPONSE TO DEHYDRATION 14) (HF=1e-1)
Module size 6 genes
NF 0.42
%ile 70.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.96PtpAffx.30368.1.S1_atCV254627hypothetical protein-1e-1At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)O.I.H.G.S.X.
0.5078.60.96PtpAffx.14629.1.S1_atDN496142f-box family protein /// f-box family protein-2e-1At2g02870kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.4673.70.97PtpAffx.7528.1.S1_atCV270873hypothetical protein-6e-10At4g35980unknown proteinO.I.H.G.S.X.
0.4471.90.96Ptp.7060.1.A1_x_atCV262139hypothetical protein-9e-27At1g23290RPL27ABO.I.H.G.S.X.
0.4471.90.96Ptp.5696.1.S1_s_atCV240717hypothetical protein-5e-41At2g19830SNF7.2O.I.H.G.S.X.
0.2136.50.96PtpAffx.12741.1.A1_atCV234093--8e-2At4g08230glycine-rich proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.898.0GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.897.4GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.797.3GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.295.6GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
1.785.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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