Co-expression analysis

Gene ID PtpAffx.2990.1.A1_at
Gene name chromatin remodeling complex subunit /// chromatin remodeling complex subunit
Homology with ArabidopsisSimilar to At3g47341: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.51
%ile 81.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7794.90.96PtpAffx.2990.1.A1_atCV266991chromatin remodeling complex subunit /// chromatin remodeling complex subunit-2e+0At3g47341unknown proteinO.I.H.G.S.X.
0.7192.60.96Ptp.4096.1.S1_atBU837517hypothetical protein-9e-1At1g08670epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.H.G.S.X.
0.5683.90.95PtpAffx.206296.1.S1_s_atpmrna12483hypothetical protein-8e-1At5g53690unknown proteinO.I.H.G.S.X.
0.5683.90.96PtpAffx.2017.7.S1_atCV271757hypothetical protein-1e+0At5g08180ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinO.I.H.G.S.X.
0.5078.60.96PtpAffx.2017.3.S1_a_atCV242885hypothetical protein-3e+0At2g24450FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR)O.I.H.G.S.X.
0.1830.80.96PtpAffx.217034.1.S1_s_atpmrna32150hypothetical protein-7e-37At3g14120-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.196.8GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.395.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.295.6GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.195.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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