Co-expression analysis

Gene ID PtpAffx.26534.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g39670: glycolipid binding / glycolipid transporter (HF=6e-10)
Module size 6 genes
NF 0.31
%ile 55.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7192.60.89PtpAffx.26534.1.S1_atCK095200hypothetical protein-6e-10At4g39670glycolipid binding / glycolipid transporterO.I.H.G.S.X.
0.5078.60.92Ptp.5844.1.S1_s_atCX169943hypothetical protein-1e-99At3g46440UXS5O.I.H.G.S.X.
0.4471.90.94PtpAffx.83113.2.S1_a_atDN500467hypothetical protein-1e-12At2g46500phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family proteinO.I.H.G.S.X.
0.3153.70.91PtpAffx.36788.2.S1_atCK106901hypothetical protein-1e-6At4g36450ATMPK14 (Mitogen-activated protein kinase 14)O.I.H.G.S.X.
0.2034.60.93Ptp.6495.1.S1_s_atBU897639hypothetical protein-9e-17At5g13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeO.I.H.G.S.X.
0.1321.60.92Ptp.4502.1.S1_atCN523586hypothetical protein-7e-53At2g44350ATCSO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.098.4GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.896.4GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.696.2GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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