Co-expression analysis

Gene ID	PtpAffx.26517.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At3g53450: unknown protein (HF=4e+0)
Module size	6 genes
NF	0.37
%ile	64.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	0.92	PtpAffx.26517.1.S1_at	CK094602	hypothetical protein	-	4e+0	At3g53450	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.92	PtpAffx.8016.1.S1_at	CX182129	hypothetical protein	-	3e-28	At5g41410	BEL1 (BELL 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.92	PtpAffx.114352.1.A1_at	CV262393	hypothetical protein	-	2e+0	At1g80133	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	0.92	PtpAffx.135805.1.A1_at	CK091310	-	-	8e-25	At1g73980	phosphoribulokinase/uridine kinase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	0.93	PtpAffx.43233.1.A1_at	CV283197	hypothetical protein	-	2e-40	At2g45870	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.24	41.8	0.92	PtpAffx.7198.1.S1_a_at	CK106201	-	-	1e+0	At3g50960	PLP3a (Phosducin-like protein 3 homolog)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	96.9	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
5.1	96.8	GSM328292	Populus x canescens root control_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
4.1	95.5	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.2	93.5	GSM328484	Populus x canescens root hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.1	93.2	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM328105	Populus x canescens leaf hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM328558	Populus x canescens root control_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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