CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID PtpAffx.2542.1.S1_at

Gene name
Homology with Arabidopsis Similar to At5g47870: unknown protein (HF=9e-31)

Module size 6 genes

NF 0.18

%ile 34.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.53 80.5 0.92 PtpAffx.2542.1.S1_at CV255768 - - 9e-31 At5g47870 unknown protein O.I. H.G. S.X.
0.44 71.9 0.92 PtpAffx.10616.2.S1_a_at CV270910 hypothetical protein - 3e-43 At2g42910 ribose-phosphate pyrophosphokinase 4 / phosphoribosyl diphosphate synthetase 4 (PRS4) O.I. H.G. S.X.
0.44 71.9 0.92 PtpAffx.31526.1.A1_at CV231954 hypothetical protein - 6e-2 At4g31860 protein phosphatase 2C, putative / PP2C, putative O.I. H.G. S.X.
0.13 21.6 0.93 PtpAffx.52208.2.A1_a_at CV272283 hypothetical protein - 1e-3 At1g72550 tRNA synthetase beta subunit family protein O.I. H.G. S.X.
0.09 14.6 0.93 Ptp.62.1.A1_s_at CK096214 hypothetical protein - 4e-1 At3g55646 unknown protein O.I. H.G. S.X.
0.08 12.9 0.93 PtpAffx.150562.1.S1_at CV270374 hypothetical protein - 2e-5 At5g49540 unknown protein O.I. H.G. S.X.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.
0.53	80.5	0.92	PtpAffx.2542.1.S1_at	CV255768	-	-	9e-31	At5g47870	unknown protein	O.I.	H.G.	S.X.
0.44	71.9	0.92	PtpAffx.10616.2.S1_a_at	CV270910	hypothetical protein	-	3e-43	At2g42910	ribose-phosphate pyrophosphokinase 4 / phosphoribosyl diphosphate synthetase 4 (PRS4)	O.I.	H.G.	S.X.
0.44	71.9	0.92	PtpAffx.31526.1.A1_at	CV231954	hypothetical protein	-	6e-2	At4g31860	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.
0.13	21.6	0.93	PtpAffx.52208.2.A1_a_at	CV272283	hypothetical protein	-	1e-3	At1g72550	tRNA synthetase beta subunit family protein	O.I.	H.G.	S.X.
0.09	14.6	0.93	Ptp.62.1.A1_s_at	CK096214	hypothetical protein	-	4e-1	At3g55646	unknown protein	O.I.	H.G.	S.X.
0.08	12.9	0.93	PtpAffx.150562.1.S1_at	CV270374	hypothetical protein	-	2e-5	At5g49540	unknown protein	O.I.	H.G.	S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.7 97.9 GSM136938 Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose GSE5887 Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
5.1 96.8 GSM327413 Populus balsamifera_1006_differentiating_xylem_midday_3 GSE13990 Populus balsamifera developmental tissue series
5.1 96.8 GSM136936 Poplar in 1 x hrp + 0.25 % sucrose no bacteria GSE5887 Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.9 96.5 GSM327411 Populus balsamifera_1006_differentiating_xylem_midday_1 GSE13990 Populus balsamifera developmental tissue series
4.5 96.1 GSM327412 Populus balsamifera_1006_differentiating_xylem_midday_2 GSE13990 Populus balsamifera developmental tissue series
2.0 88.0 GSM327402 Populus balsamifera_20071015_Etiolated_seedling_6d_2 GSE13990 Populus balsamifera developmental tissue series
2.0 88.0 GSM327400 Populus balsamifera_20071015_Etiolated_seedling_6d_1 GSE13990 Populus balsamifera developmental tissue series
1.9 87.2 GSM327380 Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1 GSE13990 Populus balsamifera developmental tissue series
1.8 86.4 GSM327403 Populus balsamifera_20071015_Etiolated_seedling_6d_3 GSE13990 Populus balsamifera developmental tissue series
1.7 85.5 GSM327409 Populus balsamifera_1006_root_midday_3 GSE13990 Populus balsamifera developmental tissue series

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title
6.7	97.9	GSM136938	Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
5.1	96.8	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
5.1	96.8	GSM136936	Poplar in 1 x hrp + 0.25 % sucrose no bacteria	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.9	96.5	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.5	96.1	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM327402	Populus balsamifera_20071015_Etiolated_seedling_6d_2	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM327400	Populus balsamifera_20071015_Etiolated_seedling_6d_1	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM327380	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1	GSE13990	Populus balsamifera developmental tissue series
1.8	86.4	GSM327403	Populus balsamifera_20071015_Etiolated_seedling_6d_3	GSE13990	Populus balsamifera developmental tissue series
1.7	85.5	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At5g47870, orthologous to the query gene, PtpAffx.2542.1.S1_at

VF %ile Gene ID Repr. ID Gene Name Func. O.I. H.G. S.X. Other DB
1.00 100.0 At5g47870 834838 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBO O.I. H.G. S.X.
0.42 53.9 At1g08470 837368 strictosidine synthase family protein F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endoplasmic reticulum, plasma membrane;PBMOFA O.I. H.G. S.X.
0.38 46.7 At2g22370 816769 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO O.I. H.G. S.X.
0.37 45.0 At1g72480 843580 - F:molecular_function unknown;P:biological_process unknown;C:Golgi apparatus;MFPO O.I. H.G. S.X.
0.36 43.6 At5g23550 832421 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFP O.I. H.G. S.X.
0.36 43.6 At1g30825 839965 DIS2 (DISTORTED TRICHOMES 2) Involved in trichome maturation. mutant displays enlarged trichomes O.I. H.G. S.X.
0.35 41.6 At5g41760 834180 nucleotide-sugar transporter family protein F:nucleotide-sugar transmembrane transporter activity, CMP-sialic acid transmembrane transporter activity;P:carbohydrate transport, nucleotide-sugar transport;C:endomembrane system, integral to membrane, Golgi membrane;MOPF O.I. H.G. S.X.
0.35 41.6 At3g49850 824147 TRB3 (TELOMERE REPEAT BINDING FACTOR 3) Encodes a telomeric DNA binding protein. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand. O.I. H.G. S.X.
0.34 39.8 At5g02280 831680 synbindin, putative F:molecular_function unknown;P:transport, ER to Golgi vesicle-mediated transport;C:cis-Golgi network;MFOP O.I. H.G. S.X.
0.32 35.7 At1g08750 837397 GPI-anchor transamidase, putative F:GPI-anchor transamidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MPOFAB O.I. H.G. S.X.
0.32 35.7 At1g14140 837973 mitochondrial substrate carrier family protein F:transporter activity, binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOV O.I. H.G. S.X.
0.32 35.7 At4g34215 829570 hydrolase Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds. O.I. H.G. S.X.
0.31 33.8 At1g19580 838545 GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex. O.I. H.G. S.X.
0.31 33.8 At1g19120 838495 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative F:molecular_function unknown;P:biological_process unknown;C:small nucleolar ribonucleoprotein complex, nucleus;MFPOA O.I. H.G. S.X.
0.31 33.8 At3g24040 821989 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein F:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:endomembrane system, membrane;MPVOB O.I. H.G. S.X.
0.30 32.1 At1g29040 839778 unknown protein F:unknown;P:unknown;C:chloroplast, vacuole;BOP O.I. H.G. S.X.
0.30 32.1 At4g35410 829694 clathrin adaptor complex small chain family protein F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex;MFOP O.I. H.G. S.X.
0.30 32.1 At5g49230 834983 HRB1 (HYPERSENSITIVE TO RED AND BLUE) Identified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction. O.I. H.G. S.X.
0.29 30.3 At5g58030 835915 transport protein particle (TRAPP) component Bet3 family protein F:molecular_function unknown;P:ER to Golgi vesicle-mediated transport;C:cellular_component unknown;MFOP O.I. H.G. S.X.
0.29 30.3 At4g17420 827453 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOAPF O.I. H.G. S.X.
0.29 30.3 At1g71750 843505 phosphoribosyltransferase family protein F:transferase activity, hypoxanthine phosphoribosyltransferase activity;P:nucleoside metabolic process, purine ribonucleoside salvage;C:cytoplasm;BOMAPF O.I. H.G. S.X.
0.28 30.3 At1g05430 837044 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.
0.28 30.3 At2g31710 817727 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. H.G. S.X.
0.28 30.3 At1g30120 839891 PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA) Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit. O.I. H.G. S.X.
0.28 30.3 At4g29870 829109 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPO O.I. H.G. S.X.
0.28 30.3 At1g04260 839565 MPI7 (CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7) Encodes protein that interacts with CaMV movement protein. Colocalizes in the cytoplasm with the movement protein. Has similarity to mammalian proteins (such as the rat PRA1) which have been described as rab acceptors. O.I. H.G. S.X.
0.28 30.3 At1g13870 837946 DRL1 (DEFORMED ROOTS AND LEAVES 1) Encodes a homolog of the yeast TOT4/KTI12 protein. Yeast TOT4/KTI12 associates with Elongator, a multisubunit complex that binds the RNA polymerase II transcription elongation complex. Ds insertion mutant has enlarged shoot apical region, 4 to 6 long slender leaves followed by spike-like structures, short roots. O.I. H.G. S.X.
0.28 30.3 At4g18060 827531 clathrin binding F:clathrin binding;P:unknown;C:unknown;MOFPB O.I. H.G. S.X.
0.27 26.2 At1g10430 837583 PP2A-2 Encodes one of two isoforms of the catalytic subunit of protein phosphatase 2A. O.I. H.G. S.X.
0.27 26.2 At3g48040 823959 ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10) Encodes a member of the Rop subfamily of Rho GTPases in Arabidopsis that contains a putative farnesylation motif. It is localized to the plasma membrane and involved in the negative regulation of ABA signalling. O.I. H.G. S.X.
0.27 26.2 At4g38040 829960 exostosin family protein F:catalytic activity;P:biological_process unknown;C:chloroplast, membrane;PMOBFV O.I. H.G. S.X.
0.27 26.2 At5g22280 832288 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. H.G. S.X.
0.27 26.2 At2g42210 818821 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. O.I. H.G. S.X.
0.26 24.4 At3g52090 824372 NRPB11 Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit. O.I. H.G. S.X.
0.26 24.4 At2g05755 815126 integral membrane family protein F:unknown;P:unknown;C:membrane;OBMFAP O.I. H.G. S.X.
0.26 24.4 At3g25040 822095 ER lumen protein retaining receptor, putative / HDEL receptor, putative F:ER retention sequence binding, receptor activity;P:protein retention in ER lumen, protein transport;C:endomembrane system, integral to membrane;MOFP O.I. H.G. S.X.
0.25 22.6 At1g18340 838415 basal transcription factor complex subunit-related F:general RNA polymerase II transcription factor activity;P:DNA repair, regulation of transcription, DNA-dependent;C:core TFIIH complex;MFOP O.I. H.G. S.X.
0.25 22.6 At1g43190 840918 polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative F:RNA binding, nucleotide binding, nucleic acid binding;P:mRNA processing;C:nucleus;MPOF O.I. H.G. S.X.
0.25 22.6 At5g57460 835851 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, chloroplast;MPOF O.I. H.G. S.X.
0.25 22.6 At5g63380 836457 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. O.I. H.G. S.X.
0.24 20.7 At1g21710 838775 OGG1 (8-OXOGUANINE-DNA GLYCOSYLASE 1) Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme. O.I. H.G. S.X.
0.24 20.7 At5g61840 836306 GUT1 F:glucuronoxylan glucuronosyltransferase activity, catalytic activity;P:secondary cell wall biogenesis, glucuronoxylan biosynthetic process;C:Golgi apparatus, membrane;PMOBF O.I. H.G. S.X.
0.24 20.7 At4g00170 828017 vesicle-associated membrane family protein / VAMP family protein F:structural molecule activity;P:biological_process unknown;C:cellular_component unknown;MPFO O.I. H.G. S.X.
0.24 20.7 At1g10670 837610 ACLA-1 One of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase. Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress. O.I. H.G. S.X.
0.23 19.3 At2g30710 817622 RabGAP/TBC domain-containing protein F:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:intracellular;MOFP O.I. H.G. S.X.
0.23 19.3 At4g15415 827211 ATB' GAMMA B' regulatory subunit of PP2A (AtB'gamma) O.I. H.G. S.X.
0.23 19.3 At1g56590 842113 clathrin adaptor complexes medium subunit family protein F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOP O.I. H.G. S.X.
0.23 19.3 At2g21600 816698 ATRER1B Key player of retrieval of ER membrane proteins O.I. H.G. S.X.
0.23 19.3 At5g05010 830383 clathrin adaptor complexes medium subunit-related F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane;MFOPB O.I. H.G. S.X.
0.23 19.3 At2g30980 817649 ASKdZeta (Arabidopsis SHAGGY-related protein kinase dZeta) Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. O.I. H.G. S.X.
0.23 19.3 At4g39240 830080 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOAVF O.I. H.G. S.X.
0.22 17.5 At1g68070 843135 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:plasma membrane;PMOFVB O.I. H.G. S.X.
0.22 17.5 At4g32930 829430 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. H.G. S.X.
0.22 17.5 At1g32050 840097 secretory carrier membrane protein (SCAMP) family protein F:transmembrane transporter activity;P:protein transport;C:mitochondrion, plasma membrane;MPOF O.I. H.G. S.X.
0.22 17.5 At1g60660 842360 CB5LP (CYTOCHROME B5-LIKE PROTEIN) member of Cytochromes b5 O.I. H.G. S.X.
0.22 17.5 At2g29900 817540 presenilin family protein F:molecular_function unknown;P:intracellular signaling cascade;C:integral to membrane, membrane;MOPA O.I. H.G. S.X.
0.22 17.5 At3g07200 819908 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPV O.I. H.G. S.X.
0.22 17.5 At5g54750 835565 transport protein particle (TRAPP) component Bet3, putative F:molecular_function unknown;P:ER to Golgi vesicle-mediated transport;C:cellular_component unknown;MFOP O.I. H.G. S.X.
0.22 17.5 At1g78690 844205 phospholipid/glycerol acyltransferase family protein F:acyltransferase activity;P:metabolic process;C:unknown;BMOFP O.I. H.G. S.X.
0.22 17.5 At2g44525 819060 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;BMOFP O.I. H.G. S.X.
0.22 17.5 At4g35980 829752 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.
0.21 15.8 At1g55130 841956 endomembrane protein 70, putative F:unknown;P:unknown;C:integral to membrane, Golgi apparatus;MPOFB O.I. H.G. S.X.
0.21 15.8 At1g47830 841199 clathrin coat assembly protein, putative F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MFOP O.I. H.G. S.X.
0.21 15.8 At2g28390 817387 SAND family protein F:unknown;P:unknown;C:chloroplast;MFOBPAV O.I. H.G. S.X.
0.20 14.4 At5g08290 830725 YLS8 Encodes Dim1 homolog. O.I. H.G. S.X.
0.20 14.4 At1g05500 837052 NTMC2T2.1 F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPFO O.I. H.G. S.X.
0.20 14.4 At1g13320 837892 PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3) one of three genes encoding the 65 kDa regulatory subunit of protein phosphatase 2A (PP2A) O.I. H.G. S.X.
0.20 14.4 At3g18430 821372 calcium-binding EF hand family protein F:calcium ion binding;P:N-terminal protein myristoylation;C:vacuole;MPOFB O.I. H.G. S.X.
0.20 14.4 At1g24360 839053 3-oxoacyl-(acyl-carrier protein) reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase F:3-oxoacyl-[acyl-carrier-protein] reductase activity;P:metabolic process, fatty acid biosynthetic process;C:chloroplast stroma, chloroplast, chloroplast envelope;BOMFPAV O.I. H.G. S.X.
0.20 14.4 At2g43360 818937 BIO2 (BIOTIN AUXOTROPH 2) Catalyzes the conversion of dethiobiotin to biotin. O.I. H.G. S.X.
0.20 14.4 At4g24550 828557 clathrin adaptor complexes medium subunit family protein F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane coat, clathrin vesicle coat, clathrin adaptor complex;MFOP O.I. H.G. S.X.
0.19 12.7 At3g20390 821584 endoribonuclease L-PSP family protein F:endoribonuclease activity;P:response to cadmium ion;C:thylakoid, mitochondrion, chloroplast, plastid, vacuole;BOFMAP O.I. H.G. S.X.
0.19 12.7 At3g12130 820388 KH domain-containing protein / zinc finger (CCCH type) family protein F:transcription factor activity, nucleic acid binding;P:regulation of transcription;C:unknown;MPOFB O.I. H.G. S.X.
0.18 11.4 At5g20060 832128 phospholipase/carboxylesterase family protein F:hydrolase activity, carboxylesterase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA O.I. H.G. S.X.
0.18 11.4 At3g22590 821831 RNA pol II accessory factor Cdc73 family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP O.I. H.G. S.X.
0.18 11.4 At1g05055 839332 GTF2H2 (GENERAL TRANSCRIPTION FACTOR IIH 2) Member of transcription factor TFIIH complex. Involved in transcription and DNA repair and interacts with AtXPD. O.I. H.G. S.X.
0.18 11.4 At2g41600 818758 - F:molecular_function unknown;P:biological_process unknown;C:mitochondrial matrix;P O.I. H.G. S.X.
0.18 11.4 At3g52300 824395 ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL) F:hydrogen ion transmembrane transporter activity;P:response to salt stress;C:in 8 components;MPFO O.I. H.G. S.X.
0.18 11.4 At5g17770 831645 ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor. O.I. H.G. S.X.
0.17 10.2 At4g25550 828660 protein binding F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFP O.I. H.G. S.X.
0.17 10.2 At3g11200 820290 AL2 (ALFIN-LIKE 2) AL2 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. O.I. H.G. S.X.
0.17 10.2 At3g12010 820375 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MOP O.I. H.G. S.X.
0.16 8.8 At1g22450 838851 COX6B (CYTOCHROME C OXIDASE 6B) subunit 6b of cytochrome c oxidase O.I. H.G. S.X.
0.16 8.8 At2g28380 817386 DRB2 (DSRNA-BINDING PROTEIN 2) Encodes a cytoplasmic dsRNA-binding protein. O.I. H.G. S.X.
0.16 8.8 At2g47580 819371 U1A (SPLICEOSOMAL PROTEIN U1A) encodes spliceosomal protein U1A O.I. H.G. S.X.
0.15 7.8 At3g18380 821367 sequence-specific DNA binding / transcription factor F:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;P O.I. H.G. S.X.
0.15 7.8 At1g54610 841903 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOFBVA O.I. H.G. S.X.
0.15 7.8 At2g26770 817218 plectin-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. H.G. S.X.
0.15 7.8 At5g28850 833004 calcium-binding EF hand family protein F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MOPF O.I. H.G. S.X.
0.15 7.8 At3g20320 821576 TGD2 (TRIGALACTOSYLDIACYLGLYCEROL2) Encodes a permease-like component of an ABC transporter involved in lipid transfer from ER to chloroplast. A phosphatidic acid-binding protein with a predicted mycobacterial cell entry domain. It is tethered to the inner chloroplast envelope membrane facing the outer envelope membrane. Presumed bacterial orthologs of TGD1 and TGD2 in Gram-negative bacteria are typically organized in transcriptional units, suggesting their involvement in a common biological process. O.I. H.G. S.X.
0.14 6.8 At3g51050 824269 FG-GAP repeat-containing protein F:molecular_function unknown;P:cell-matrix adhesion;C:integrin complex, integral to membrane, plasma membrane;OPM O.I. H.G. S.X.
0.13 5.8 At3g06350 819809 MEE32 (MATERNAL EFFECT EMBRYO ARREST 32) F:NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity;P:embryonic development ending in seed dormancy;C:chloroplast stroma, chloroplast;BOAFP O.I. H.G. S.X.
0.13 5.8 At3g58580 825027 hydrolase F:hydrolase activity;P:unknown;C:cellular_component unknown;MFOPB O.I. H.G. S.X.
0.12 4.9 At5g66120 836744 3-dehydroquinate synthase, putative F:3-dehydroquinate synthase activity, carbon-oxygen lyase activity, acting on phosphates;P:aromatic amino acid family biosynthetic process, biosynthetic process;C:chloroplast;OBFAPMV O.I. H.G. S.X.

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	O.I.	H.G.	S.X.
1.00	100.0	At5g47870	834838	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBO	O.I.	H.G.	S.X.
0.42	53.9	At1g08470	837368	strictosidine synthase family protein	F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endoplasmic reticulum, plasma membrane;PBMOFA	O.I.	H.G.	S.X.
0.38	46.7	At2g22370	816769	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO	O.I.	H.G.	S.X.
0.37	45.0	At1g72480	843580	-	F:molecular_function unknown;P:biological_process unknown;C:Golgi apparatus;MFPO	O.I.	H.G.	S.X.
0.36	43.6	At5g23550	832421	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFP	O.I.	H.G.	S.X.
0.36	43.6	At1g30825	839965	DIS2 (DISTORTED TRICHOMES 2)	Involved in trichome maturation. mutant displays enlarged trichomes	O.I.	H.G.	S.X.
0.35	41.6	At5g41760	834180	nucleotide-sugar transporter family protein	F:nucleotide-sugar transmembrane transporter activity, CMP-sialic acid transmembrane transporter activity;P:carbohydrate transport, nucleotide-sugar transport;C:endomembrane system, integral to membrane, Golgi membrane;MOPF	O.I.	H.G.	S.X.
0.35	41.6	At3g49850	824147	TRB3 (TELOMERE REPEAT BINDING FACTOR 3)	Encodes a telomeric DNA binding protein. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.	O.I.	H.G.	S.X.
0.34	39.8	At5g02280	831680	synbindin, putative	F:molecular_function unknown;P:transport, ER to Golgi vesicle-mediated transport;C:cis-Golgi network;MFOP	O.I.	H.G.	S.X.
0.32	35.7	At1g08750	837397	GPI-anchor transamidase, putative	F:GPI-anchor transamidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MPOFAB	O.I.	H.G.	S.X.
0.32	35.7	At1g14140	837973	mitochondrial substrate carrier family protein	F:transporter activity, binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOV	O.I.	H.G.	S.X.
0.32	35.7	At4g34215	829570	hydrolase	Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.	O.I.	H.G.	S.X.
0.31	33.8	At1g19580	838545	GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)	Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.	O.I.	H.G.	S.X.
0.31	33.8	At1g19120	838495	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	F:molecular_function unknown;P:biological_process unknown;C:small nucleolar ribonucleoprotein complex, nucleus;MFPOA	O.I.	H.G.	S.X.
0.31	33.8	At3g24040	821989	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	F:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:endomembrane system, membrane;MPVOB	O.I.	H.G.	S.X.
0.30	32.1	At1g29040	839778	unknown protein	F:unknown;P:unknown;C:chloroplast, vacuole;BOP	O.I.	H.G.	S.X.
0.30	32.1	At4g35410	829694	clathrin adaptor complex small chain family protein	F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex;MFOP	O.I.	H.G.	S.X.
0.30	32.1	At5g49230	834983	HRB1 (HYPERSENSITIVE TO RED AND BLUE)	Identified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction.	O.I.	H.G.	S.X.
0.29	30.3	At5g58030	835915	transport protein particle (TRAPP) component Bet3 family protein	F:molecular_function unknown;P:ER to Golgi vesicle-mediated transport;C:cellular_component unknown;MFOP	O.I.	H.G.	S.X.
0.29	30.3	At4g17420	827453	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOAPF	O.I.	H.G.	S.X.
0.29	30.3	At1g71750	843505	phosphoribosyltransferase family protein	F:transferase activity, hypoxanthine phosphoribosyltransferase activity;P:nucleoside metabolic process, purine ribonucleoside salvage;C:cytoplasm;BOMAPF	O.I.	H.G.	S.X.
0.28	30.3	At1g05430	837044	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.28	30.3	At2g31710	817727	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	H.G.	S.X.
0.28	30.3	At1g30120	839891	PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA)	Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit.	O.I.	H.G.	S.X.
0.28	30.3	At4g29870	829109	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPO	O.I.	H.G.	S.X.
0.28	30.3	At1g04260	839565	MPI7 (CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7)	Encodes protein that interacts with CaMV movement protein. Colocalizes in the cytoplasm with the movement protein. Has similarity to mammalian proteins (such as the rat PRA1) which have been described as rab acceptors.	O.I.	H.G.	S.X.
0.28	30.3	At1g13870	837946	DRL1 (DEFORMED ROOTS AND LEAVES 1)	Encodes a homolog of the yeast TOT4/KTI12 protein. Yeast TOT4/KTI12 associates with Elongator, a multisubunit complex that binds the RNA polymerase II transcription elongation complex. Ds insertion mutant has enlarged shoot apical region, 4 to 6 long slender leaves followed by spike-like structures, short roots.	O.I.	H.G.	S.X.
0.28	30.3	At4g18060	827531	clathrin binding	F:clathrin binding;P:unknown;C:unknown;MOFPB	O.I.	H.G.	S.X.
0.27	26.2	At1g10430	837583	PP2A-2	Encodes one of two isoforms of the catalytic subunit of protein phosphatase 2A.	O.I.	H.G.	S.X.
0.27	26.2	At3g48040	823959	ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)	Encodes a member of the Rop subfamily of Rho GTPases in Arabidopsis that contains a putative farnesylation motif. It is localized to the plasma membrane and involved in the negative regulation of ABA signalling.	O.I.	H.G.	S.X.
0.27	26.2	At4g38040	829960	exostosin family protein	F:catalytic activity;P:biological_process unknown;C:chloroplast, membrane;PMOBFV	O.I.	H.G.	S.X.
0.27	26.2	At5g22280	832288	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	H.G.	S.X.
0.27	26.2	At2g42210	818821	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family.	O.I.	H.G.	S.X.
0.26	24.4	At3g52090	824372	NRPB11	Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.	O.I.	H.G.	S.X.
0.26	24.4	At2g05755	815126	integral membrane family protein	F:unknown;P:unknown;C:membrane;OBMFAP	O.I.	H.G.	S.X.
0.26	24.4	At3g25040	822095	ER lumen protein retaining receptor, putative / HDEL receptor, putative	F:ER retention sequence binding, receptor activity;P:protein retention in ER lumen, protein transport;C:endomembrane system, integral to membrane;MOFP	O.I.	H.G.	S.X.
0.25	22.6	At1g18340	838415	basal transcription factor complex subunit-related	F:general RNA polymerase II transcription factor activity;P:DNA repair, regulation of transcription, DNA-dependent;C:core TFIIH complex;MFOP	O.I.	H.G.	S.X.
0.25	22.6	At1g43190	840918	polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative	F:RNA binding, nucleotide binding, nucleic acid binding;P:mRNA processing;C:nucleus;MPOF	O.I.	H.G.	S.X.
0.25	22.6	At5g57460	835851	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, chloroplast;MPOF	O.I.	H.G.	S.X.
0.25	22.6	At5g63380	836457	4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein	Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.	O.I.	H.G.	S.X.
0.24	20.7	At1g21710	838775	OGG1 (8-OXOGUANINE-DNA GLYCOSYLASE 1)	Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme.	O.I.	H.G.	S.X.
0.24	20.7	At5g61840	836306	GUT1	F:glucuronoxylan glucuronosyltransferase activity, catalytic activity;P:secondary cell wall biogenesis, glucuronoxylan biosynthetic process;C:Golgi apparatus, membrane;PMOBF	O.I.	H.G.	S.X.
0.24	20.7	At4g00170	828017	vesicle-associated membrane family protein / VAMP family protein	F:structural molecule activity;P:biological_process unknown;C:cellular_component unknown;MPFO	O.I.	H.G.	S.X.
0.24	20.7	At1g10670	837610	ACLA-1	One of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase. Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress.	O.I.	H.G.	S.X.
0.23	19.3	At2g30710	817622	RabGAP/TBC domain-containing protein	F:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:intracellular;MOFP	O.I.	H.G.	S.X.
0.23	19.3	At4g15415	827211	ATB' GAMMA	B' regulatory subunit of PP2A (AtB'gamma)	O.I.	H.G.	S.X.
0.23	19.3	At1g56590	842113	clathrin adaptor complexes medium subunit family protein	F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOP	O.I.	H.G.	S.X.
0.23	19.3	At2g21600	816698	ATRER1B	Key player of retrieval of ER membrane proteins	O.I.	H.G.	S.X.
0.23	19.3	At5g05010	830383	clathrin adaptor complexes medium subunit-related	F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane;MFOPB	O.I.	H.G.	S.X.
0.23	19.3	At2g30980	817649	ASKdZeta (Arabidopsis SHAGGY-related protein kinase dZeta)	Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.	O.I.	H.G.	S.X.
0.23	19.3	At4g39240	830080	kelch repeat-containing F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOAVF	O.I.	H.G.	S.X.
0.22	17.5	At1g68070	843135	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:plasma membrane;PMOFVB	O.I.	H.G.	S.X.
0.22	17.5	At4g32930	829430	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	H.G.	S.X.
0.22	17.5	At1g32050	840097	secretory carrier membrane protein (SCAMP) family protein	F:transmembrane transporter activity;P:protein transport;C:mitochondrion, plasma membrane;MPOF	O.I.	H.G.	S.X.
0.22	17.5	At1g60660	842360	CB5LP (CYTOCHROME B5-LIKE PROTEIN)	member of Cytochromes b5	O.I.	H.G.	S.X.
0.22	17.5	At2g29900	817540	presenilin family protein	F:molecular_function unknown;P:intracellular signaling cascade;C:integral to membrane, membrane;MOPA	O.I.	H.G.	S.X.
0.22	17.5	At3g07200	819908	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPV	O.I.	H.G.	S.X.
0.22	17.5	At5g54750	835565	transport protein particle (TRAPP) component Bet3, putative	F:molecular_function unknown;P:ER to Golgi vesicle-mediated transport;C:cellular_component unknown;MFOP	O.I.	H.G.	S.X.
0.22	17.5	At1g78690	844205	phospholipid/glycerol acyltransferase family protein	F:acyltransferase activity;P:metabolic process;C:unknown;BMOFP	O.I.	H.G.	S.X.
0.22	17.5	At2g44525	819060	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;BMOFP	O.I.	H.G.	S.X.
0.22	17.5	At4g35980	829752	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.21	15.8	At1g55130	841956	endomembrane protein 70, putative	F:unknown;P:unknown;C:integral to membrane, Golgi apparatus;MPOFB	O.I.	H.G.	S.X.
0.21	15.8	At1g47830	841199	clathrin coat assembly protein, putative	F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MFOP	O.I.	H.G.	S.X.
0.21	15.8	At2g28390	817387	SAND family protein	F:unknown;P:unknown;C:chloroplast;MFOBPAV	O.I.	H.G.	S.X.
0.20	14.4	At5g08290	830725	YLS8	Encodes Dim1 homolog.	O.I.	H.G.	S.X.
0.20	14.4	At1g05500	837052	NTMC2T2.1	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPFO	O.I.	H.G.	S.X.
0.20	14.4	At1g13320	837892	PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3)	one of three genes encoding the 65 kDa regulatory subunit of protein phosphatase 2A (PP2A)	O.I.	H.G.	S.X.
0.20	14.4	At3g18430	821372	calcium-binding EF hand family protein	F:calcium ion binding;P:N-terminal protein myristoylation;C:vacuole;MPOFB	O.I.	H.G.	S.X.
0.20	14.4	At1g24360	839053	3-oxoacyl-(acyl-carrier protein) reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase	F:3-oxoacyl-[acyl-carrier-protein] reductase activity;P:metabolic process, fatty acid biosynthetic process;C:chloroplast stroma, chloroplast, chloroplast envelope;BOMFPAV	O.I.	H.G.	S.X.
0.20	14.4	At2g43360	818937	BIO2 (BIOTIN AUXOTROPH 2)	Catalyzes the conversion of dethiobiotin to biotin.	O.I.	H.G.	S.X.
0.20	14.4	At4g24550	828557	clathrin adaptor complexes medium subunit family protein	F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane coat, clathrin vesicle coat, clathrin adaptor complex;MFOP	O.I.	H.G.	S.X.
0.19	12.7	At3g20390	821584	endoribonuclease L-PSP family protein	F:endoribonuclease activity;P:response to cadmium ion;C:thylakoid, mitochondrion, chloroplast, plastid, vacuole;BOFMAP	O.I.	H.G.	S.X.
0.19	12.7	At3g12130	820388	KH domain-containing protein / zinc finger (CCCH type) family protein	F:transcription factor activity, nucleic acid binding;P:regulation of transcription;C:unknown;MPOFB	O.I.	H.G.	S.X.
0.18	11.4	At5g20060	832128	phospholipase/carboxylesterase family protein	F:hydrolase activity, carboxylesterase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA	O.I.	H.G.	S.X.
0.18	11.4	At3g22590	821831	RNA pol II accessory factor Cdc73 family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP	O.I.	H.G.	S.X.
0.18	11.4	At1g05055	839332	GTF2H2 (GENERAL TRANSCRIPTION FACTOR IIH 2)	Member of transcription factor TFIIH complex. Involved in transcription and DNA repair and interacts with AtXPD.	O.I.	H.G.	S.X.
0.18	11.4	At2g41600	818758	-	F:molecular_function unknown;P:biological_process unknown;C:mitochondrial matrix;P	O.I.	H.G.	S.X.
0.18	11.4	At3g52300	824395	ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL)	F:hydrogen ion transmembrane transporter activity;P:response to salt stress;C:in 8 components;MPFO	O.I.	H.G.	S.X.
0.18	11.4	At5g17770	831645	ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)	Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.	O.I.	H.G.	S.X.
0.17	10.2	At4g25550	828660	protein binding	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFP	O.I.	H.G.	S.X.
0.17	10.2	At3g11200	820290	AL2 (ALFIN-LIKE 2)	AL2 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.	O.I.	H.G.	S.X.
0.17	10.2	At3g12010	820375	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOP	O.I.	H.G.	S.X.
0.16	8.8	At1g22450	838851	COX6B (CYTOCHROME C OXIDASE 6B)	subunit 6b of cytochrome c oxidase	O.I.	H.G.	S.X.
0.16	8.8	At2g28380	817386	DRB2 (DSRNA-BINDING PROTEIN 2)	Encodes a cytoplasmic dsRNA-binding protein.	O.I.	H.G.	S.X.
0.16	8.8	At2g47580	819371	U1A (SPLICEOSOMAL PROTEIN U1A)	encodes spliceosomal protein U1A	O.I.	H.G.	S.X.
0.15	7.8	At3g18380	821367	sequence-specific DNA binding / transcription factor	F:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;P	O.I.	H.G.	S.X.
0.15	7.8	At1g54610	841903	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOFBVA	O.I.	H.G.	S.X.
0.15	7.8	At2g26770	817218	plectin-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	H.G.	S.X.
0.15	7.8	At5g28850	833004	calcium-binding EF hand family protein	F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MOPF	O.I.	H.G.	S.X.
0.15	7.8	At3g20320	821576	TGD2 (TRIGALACTOSYLDIACYLGLYCEROL2)	Encodes a permease-like component of an ABC transporter involved in lipid transfer from ER to chloroplast. A phosphatidic acid-binding protein with a predicted mycobacterial cell entry domain. It is tethered to the inner chloroplast envelope membrane facing the outer envelope membrane. Presumed bacterial orthologs of TGD1 and TGD2 in Gram-negative bacteria are typically organized in transcriptional units, suggesting their involvement in a common biological process.	O.I.	H.G.	S.X.
0.14	6.8	At3g51050	824269	FG-GAP repeat-containing protein	F:molecular_function unknown;P:cell-matrix adhesion;C:integrin complex, integral to membrane, plasma membrane;OPM	O.I.	H.G.	S.X.
0.13	5.8	At3g06350	819809	MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)	F:NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity;P:embryonic development ending in seed dormancy;C:chloroplast stroma, chloroplast;BOAFP	O.I.	H.G.	S.X.
0.13	5.8	At3g58580	825027	hydrolase	F:hydrolase activity;P:unknown;C:cellular_component unknown;MFOPB	O.I.	H.G.	S.X.
0.12	4.9	At5g66120	836744	3-dehydroquinate synthase, putative	F:3-dehydroquinate synthase activity, carbon-oxygen lyase activity, acting on phosphates;P:aromatic amino acid family biosynthetic process, biosynthetic process;C:chloroplast;OBFAPMV	O.I.	H.G.	S.X.

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Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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Gene ID	PtpAffx.2542.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g47870: unknown protein (HF=9e-31)
Module size	6 genes
NF	0.18
%ile	34.7

Co-expression analysis

Gene ID PtpAffx.2542.1.S1_at Gene name Homology with ArabidopsisSimilar to At5g47870: unknown protein (HF=9e-31) Module size 6 genes NF 0.18 %ile 34.7

Co-expressed genes

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Specific experiments for the module

Inter-species module comparison

Select a plant to compare co-expressed genes between species.Glycine_maxHordeum_vulgareOryza_sativaTriticum_aestivumVitis_viniferaZea_mays

Gene ID PtpAffx.2542.1.S1_at

Gene name
Homology with Arabidopsis Similar to At5g47870: unknown protein (HF=9e-31)

Module size 6 genes

NF 0.18

%ile 34.7

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays