Co-expression analysis

Gene ID	PtpAffx.25163.2.A1_at
Gene name	glycosyltransferase, CAZy family GT8
Homology with Arabidopsis	Similar to At3g62660: GATL7 (Galacturonosyltransferase-like 7) (HF=7e-21)
Module size	6 genes
NF	0.26
%ile	46.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	96.0	0.91	PtpAffx.25163.2.A1_at	CV230336	glycosyltransferase, CAZy family GT8	-	7e-21	At3g62660	GATL7 (Galacturonosyltransferase-like 7)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.91	PtpAffx.3459.2.S1_s_at	BU812286	hypothetical protein	-	1e+0	At5g09890	protein kinase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.92	PtpAffx.212384.1.S1_at	pmrna24266	hypothetical protein	-	6e-50	At4g09630	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.22	38.3	0.91	PtpAffx.62923.1.S1_s_at	CV261260	hypothetical protein	-	1e-6	At4g19645	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.21	36.5	0.91	PtpAffx.12146.2.A1_at	CV241294	hypothetical protein	-	4e-110	At5g55190	RAN3 (RAN GTPASE 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.09	14.6	0.90	PtpAffx.52361.2.A1_s_at	CV252050	hypothetical protein	-	4e-21	At5g51550	EXL3 (EXORDIUM LIKE 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.6	97.2	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.6	96.2	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.8	94.9	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM372042	Clone1979_LPI5_N-_8w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.3	89.8	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.2	89.3	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM372098	Clone3200_LPI5_N-_8w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.1	88.6	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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