Co-expression analysis

Gene ID PtpAffx.249.66.A1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g33040: ATP synthase gamma chain, mitochondrial (ATPC) (HF=2e-52)
Module size 9 genes
NF 0.69
%ile 95.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7493.80.96PtpAffx.249.66.A1_s_atCV227553hypothetical protein-2e-52At2g33040ATP synthase gamma chain, mitochondrial (ATPC)O.I.H.G.S.X.
0.8997.80.97PtpAffx.14196.1.S1_s_atCV251866hypothetical protein-4e-4At1g72020unknown proteinO.I.H.G.S.X.
0.8296.30.97PtpAffx.13016.1.S1_s_atCV273742hypothetical protein-2e-46At1g09330unknown proteinO.I.H.G.S.X.
0.7192.60.97PtpAffx.11912.1.S1_atCV247192hypothetical protein-2e-34At3g07680emp24/gp25L/p24 family proteinO.I.H.G.S.X.
0.6791.10.96Ptp.746.1.A1_atCV251238hypothetical protein-3e-2At2g16595-O.I.H.G.S.X.
0.6791.10.97PtpAffx.4942.2.S1_s_atCV236355hypothetical protein-1e-11At2g21160translocon-associated protein alpha (TRAP alpha) family proteinO.I.H.G.S.X.
0.6488.40.96PtpAffx.450.1.S1_atCK318302hypothetical protein-2e-72At5g50850MAB1 (MACCI-BOU)O.I.H.G.S.X.
0.5480.80.96PtpAffx.936.1.S1_s_atAF121194.2hypothetical protein-2e-50At1g78300GRF2 (GENERAL REGULATORY FACTOR 2)O.I.H.G.S.X.
0.4471.90.97Ptp.2351.1.S1_s_atCF936500hypothetical protein-2e-6At4g30010unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.794.7GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.992.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.289.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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