Co-expression analysis

Gene ID PtpAffx.249.167.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g09440: heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3) (HF=4e-13)
Module size 6 genes
NF 0.10
%ile 20.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4471.90.85PtpAffx.249.167.S1_atCV229731hypothetical protein-4e-13At3g09440heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)O.I.H.G.S.X.
0.1525.30.86PtpAffx.759.2.S1_atCV274211hypothetical protein-1e-7At3g62830AUD1O.I.H.G.S.X.
0.1118.10.86PtpAffx.201198.1.S1_atpmrna2371--1e-8At1g49960xanthine/uracil permease family proteinO.I.H.G.S.X.
0.0812.90.86PtpAffx.224412.1.S1_atpmrna42911hypothetical protein-5e-27At5g03260LAC11 (laccase 11)O.I.H.G.S.X.
0.069.80.86PtpAffx.5888.1.A1_a_atCV248932hypothetical protein-6e-60At3g09820ADK1 (adenosine kinase 1)O.I.H.G.S.X.
0.046.90.85Ptp.373.1.A1_atCK088690hypothetical protein-4e-1At2g28470BGAL8 (beta-galactosidase 8)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.698.3GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.897.4GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
2.992.5GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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