Co-expression analysis

Gene ID	PtpAffx.22769.1.A1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At3g51330: aspartyl protease family protein (HF=1e-1)
Module size	6 genes
NF	0.10
%ile	21.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	71.9	0.87	PtpAffx.22769.1.A1_at	CV270424	hypothetical protein	-	1e-1	At3g51330	aspartyl protease family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.88	PtpAffx.213954.1.S1_at	pmrna27198	pho1-like protein	-	3e-13	At2g03260	EXS family protein / ERD1/XPR1/SYG1 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	0.86	PtpAffx.75514.1.A1_at	CV267254	-	-	8e-2	At2g01530	MLP329 (MLP-LIKE PROTEIN 329)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.11	18.1	0.87	PtpAffx.208898.1.S1_at	pmrna17651	hypothetical protein	-	2e-13	At1g71110	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.04	6.9	0.89	PtpAffx.21021.1.S1_a_at	CV265487	hypothetical protein	-	3e-9	At2g20100	ethylene-responsive family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.04	6.9	0.87	PtpAffx.3512.1.S1_at	CX176608	hypothetical protein	-	1e-9	At1g13610	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.3	98.5	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
6.6	97.9	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
5.7	97.3	GSM328559	Populus x canescens root control_rep_10	GSE13109	Effect of hypoxia on gene expression in Grey poplar
4.3	95.8	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.3	93.7	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.2	93.5	GSM328533	Populus x canescens root hypoxia_rep_03	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.1	93.2	GSM334224	Populus balsamifera_1006_mature_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.0	92.9	GSM328532	Populus x canescens root hypoxia_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327281	Populus balsamifera_20071015_Seedling_continuous_light_6d_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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