Co-expression analysis

Gene ID PtpAffx.22761.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g29810: ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2) (HF=3e-5)
Module size 7 genes
NF 0.63
%ile 92.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5380.50.94PtpAffx.22761.1.A1_atBP932638hypothetical protein-3e-5At4g29810ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2)O.I.H.G.S.X.
0.8096.00.93PtpAffx.24406.3.A1_atCV260911hypothetical protein-2e-14At4g31300PBA1O.I.H.G.S.X.
0.7192.60.93PtpAffx.137473.2.A1_a_atCV234646hypothetical protein-4e-1At4g38770PRP4 (PROLINE-RICH PROTEIN 4)O.I.H.G.S.X.
0.6187.00.97Ptp.2147.3.S1_atCV259150glutaredoxin S14-6e-12At3g54900CXIP1 (CAX INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.5683.90.94Ptp.4514.1.S1_atCV269099--4e-14At2g28230-O.I.H.G.S.X.
0.5380.50.95PtpAffx.159720.1.A1_atCV268538--2e-2At1g29850double-stranded DNA-binding family proteinO.I.H.G.S.X.
0.5279.40.94PtpAffx.86753.2.A1_atCV258677hypothetical protein-1e+0At4g20030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.794.7GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.393.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.590.9GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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