Co-expression analysis

Gene ID PtpAffx.225769.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g21230: protein kinase family protein (HF=7e-5)
Module size 6 genes
NF 0.03
%ile 5.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6187.00.81PtpAffx.225769.1.S1_s_atpmrna45354hypothetical protein-7e-5At4g21230protein kinase family proteinO.I.H.G.S.X.
0.3661.60.88PtpAffx.212872.1.S1_s_atpmrna25193hypothetical protein-4e-40At5g50400PAP27 (PURPLE ACID PHOSPHATASE 27)O.I.H.G.S.X.
0.1219.60.88PtpAffx.131946.1.S1_s_atBU893117hypothetical protein-2e-7At3g18830ATPLT5 (POLYOL TRANSPORTER 5)O.I.H.G.S.X.
0.0711.60.84PtpAffx.5.2.S1_a_atCV249715hypothetical protein-1e-3At2g38380peroxidase 22 (PER22) (P22) (PRXEA) / basic peroxidase EO.I.H.G.S.X.
0.046.90.79PtpAffx.224389.1.S1_atpmrna42874glutamate-gated kainate-type ion channel receptor subunit GluR5-3e-1At5g11210ATGLR2.5O.I.H.G.S.X.
0.012.20.79PtpAffx.225538.1.S1_atpmrna44954hypothetical protein-1e+0At1g55910ZIP11 (ZINC TRANSPORTER 11 PRECURSOR)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.998.0GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.296.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.596.1GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.295.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.295.6GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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