Co-expression analysis

Gene ID PtpAffx.225099.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g30020: subtilase family protein (HF=3e-109)
Module size 6 genes
NF 0.66
%ile 93.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8096.00.93PtpAffx.225099.1.S1_atpmrna44197hypothetical protein-3e-109At4g30020subtilase family proteinO.I.H.G.S.X.
0.6791.10.93PtpAffx.205154.1.S1_atpmrna10202hypothetical protein-2e-1At2g01870unknown proteinO.I.H.G.S.X.
0.6086.00.94PtpAffx.203765.1.S1_atpmrna7437hypothetical protein-8e-1At4g28680tyrosine decarboxylase, putativeO.I.H.G.S.X.
0.5784.20.93PtpAffx.204886.1.S1_atpmrna9652white-brown-complex ABC transporter family-5e-46At1g51500CER5 (ECERIFERUM 5)O.I.H.G.S.X.
0.5078.60.94PtpAffx.249.169.A1_a_atCV260069hypothetical protein-1e+0At5g42030ABIL4 (ABL INTERACTOR-LIKE PROTEIN 4)O.I.H.G.S.X.
0.4067.00.93PtpAffx.134527.1.A1_atCV232655hypothetical protein-1e-6At1g28110SCPL45 (SERINE CARBOXYPEPTIDASE-LIKE 45 PRECURSOR)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.095.3GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.694.5GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.494.0GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
3.293.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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