Co-expression analysis

Gene ID PtpAffx.224189.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g34135: UGT73B2 (UDP-GLUCOSYLTRANSFERASE 73B2) (HF=8e-4)
Module size 6 genes
NF 0.71
%ile 96.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.90PtpAffx.224189.1.S1_atpmrna42494hypothetical protein-8e-4At4g34135UGT73B2 (UDP-GLUCOSYLTRANSFERASE 73B2)O.I.H.G.S.X.
0.8096.00.89Ptp.4116.1.S1_s_atCV283544hypothetical protein-3e-2At3g51680short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.6791.10.89Ptp.4116.1.S1_atCV283544--3e-2At3g51680short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.6791.10.89PtpAffx.206339.1.S1_atpmrna12585hypothetical protein-2e+0At3g51680short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.5380.50.85PtpAffx.249.686.S1_atCV262164hypothetical protein-9e-1At5g02550unknown proteinO.I.H.G.S.X.
0.5078.60.87PtpAffx.5323.1.S1_atCV258344cinnamyl alcohol dehydrogenase-like protein-7e-4At4g37970CAD6 (CINNAMYL ALCOHOL DEHYDROGENASE 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.297.6GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
6.097.5GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.897.4GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.796.3GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.495.9GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.894.9GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.794.7GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.785.5GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.785.5GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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