Co-expression analysis

Gene ID	PtpAffx.224029.1.S1_x_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g41520: 40S ribosomal protein S10 (RPS10B) (HF=1e+0)
Module size	7 genes
NF	0.27
%ile	48.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	78.6	0.86	PtpAffx.224029.1.S1_x_at	pmrna42263	hypothetical protein	-	1e+0	At5g41520	40S ribosomal protein S10 (RPS10B)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.86	PtpAffx.216632.1.S1_at	pmrna31543	hypothetical protein	-	2e+1	At3g30222	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.87	PtpAffx.206972.1.S1_at	pmrna13819	hypothetical protein	-	6e-2	At5g49150	GEX2 (GAMETE EXPRESSED 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.23	40.5	0.85	PtpAffx.95500.1.A1_at	CV243681	-	-	1e+0	At5g38140	NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.22	38.3	0.87	PtpAffx.212467.1.S1_x_at	pmrna24427	hypothetical protein	-	4e-1	At5g26220	ChaC-like family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.20	34.6	0.84	PtpAffx.209763.1.S1_at	pmrna19260	hypothetical protein	-	3e+0	At5g48945	LCR46 (Low-molecular-weight cysteine-rich 46)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.16	26.9	0.86	PtpAffx.216708.1.S1_at	pmrna31662	hypothetical protein	-	4e-1	At1g01130	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.3	99.6	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
11.4	99.2	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
6.5	97.8	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.2	95.6	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM372089	Clone3200_LPI2_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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