Co-expression analysis

Gene ID	PtpAffx.224027.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g19257: unknown protein (HF=4e+0)
Module size	8 genes
NF	0.02
%ile	4.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.37	62.3	0.75	PtpAffx.224027.1.S1_at	pmrna42259	hypothetical protein	-	4e+0	At5g19257	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.10	16.3	0.75	PtpAffx.211210.1.S1_at	pmrna22025	hypothetical protein	-	3e+0	At3g55820	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.05	8.3	0.75	PtpAffx.861.1.A1_at	CV267999	-	-	3e-1	At1g67880	glycosyl transferase family 17 protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.03	5.2	0.75	PtpAffx.205174.1.S1_at	pmrna10244	hypothetical protein	-	3e-1	At2g25190	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.02	3.6	0.75	PtpAffx.5646.1.A1_at	CV240792	-	-	1e-1	At1g16916	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.76	Ptp.207.1.A1_at	CK087456	-	-	3e-3	At2g22080	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.76	PtpAffx.215568.1.S1_at	pmrna29839	hypothetical protein	-	8e-1	At4g22756	SMO1-2 (STEROL C4-METHYL OXIDASE 1-2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.75	PtpAffx.207165.1.S1_at	pmrna14215	hypothetical protein	-	2e-10	At4g39440	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	96.5	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.0	95.3	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.3	93.7	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM362886	Clone1979_LPI2_N-_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.7	91.8	GSM362883	Clone1979_LPI2_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.3	89.8	GSM327408	Populus balsamifera_1006_root_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.9	87.2	GSM362887	Clone1979_LPI5_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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